Brettanomyces bruxellensis: BRETT_005037
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Entry
BRETT_005037 CDS
T07183
Symbol
RET1
Name
(RefSeq) DNA-directed RNA polymerase III core subunit ret1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BRETT_005037 (RET1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbrx03021
]
BRETT_005037 (RET1)
Enzymes [BR:
bbrx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BRETT_005037 (RET1)
Transcription machinery [BR:
bbrx03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
BRETT_005037 (RET1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
64576960
NCBI-ProteinID:
XP_041136874
UniProt:
A0A871RCS2
LinkDB
All DBs
Position
7:1295430..1298924
Genome browser
AA seq
1164 aa
AA seq
DB search
MTSKNEAMDELLKPMYKGKALTDPINTAKDKWNLVPAFLKVKGLVKQHLDSYNYFVDVDL
KKIVKANEMVVSDVDPSFYLKYLDIRVGYKSNGDREKPEVVLPPHECRLRDLTYSAPIYV
DVEYTRGRKIIIHRDLEIGRMPIMLRSNKCILHGRSEAEMAYLNECPLDPGGYFVVNGTE
KVILVQEQLSKNRIIVETDRKKGIVQASVTSSTHERKSKTYVVAKKGRIYLKHNSISEEV
PIVVVLKAAGVVSDMEIMQLVCGDDSAYQDLFAENFEAASRLGVFTQRQALEFIGRRVKT
VRRMNAPRLSVLQEGLEAVATTICAHLTVARRDFRQKAVYIATMTRRVVMAMQNPKLVDD
RDYAGNKRLELAGQLLSLLFEDLFKKFNNDFKANLDKILRRPSRASEFDALLHINIHSNN
VTMGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYIAALGMMTRISSQFEKSRKVSGPRS
LQPSQFGMLCPADTPEGASCGLVKNLALMTHITTDSEEEPIRRACFMLGAQDIGQADSRA
LHARGSFGIYLNGTMIAVTRYPGAFVRRFRLLRRSGRLDAFVSIHTDLQQAAVHLASDGG
RICRPLIIVDRGVSRVTARHLALLRDGRWGFDDFLRRGLVEYLDVNEENDALIALYERDI
GQLTTHLEIEPFTVLGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQFRRIDTLLY
LLCYPEQPLVRTRTIELVKYNRLPAGHNATVAVMSYSGYDIEDALLLNRASIDRGFGRCQ
TLRKNTALLKRYPNHTKDIVGGMRLDGSGRPIYQHSALGGDGLAEVGSMVQSGQVIVNKC
VPTGPTGPGGPSGGGNSTNPSGRGPGGGRNGQSRERESATSSFQESPLVYRGPVPSYVDQ
VMLTVGDNDQALIKVLLRQTRRPELGDKFSSRHGQKGVCGMIIKQEDMPFSDQGICPDMI
MNPHGFPSRMTVGKMMELVSGKAGVLRGTFEYGTCFGGSDLSEMSKILVSKGFNYGGKDM
LYSGTTGEALQAYIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRARDGGLRLG
EMERDCLIAYGASQLLLERLMLSSDAFDVDICQGCGLMGYNGWCPMCKSSQNVVKMTIPY
AAKLLFQELISMNIAPRLQLGDVF
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcaaaaatgaggctatggacgaactgctgaagccaatgtacaaagggaaagcg
ttgacagacccaatcaacacggcaaaagacaagtggaatttggtgccggcattcttgaaa
gtgaagggactcgtgaagcagcacttggactcgtacaactacttcgtggacgtggacttg
aagaaaatcgtcaaggcaaacgagatggtggtgtcggacgtggacccgagcttctacctg
aagtacctggacatccgggtgggatacaagagcaacggggaccgggagaagccggaggtg
gtgctgccgccgcacgagtgccggctccgggacctgacgtacagtgctccgatctacgtg
gacgtggagtacacgcgggggcggaagatcatcatccaccgggacttggagatcggccgg
atgcccatcatgctccggtcgaacaagtgcatcttgcacgggcgcagcgaggcggagatg
gcgtacctgaacgagtgcccgttggacccgggcgggtactttgtggtgaacggcacggag
aaggtgatcttggtccaggagcagttgagtaagaaccggattatcgtggagacggaccgc
aaaaagggcatcgtgcaggcgtcggtgacgtcgtcgacgcacgagcgcaagtccaagacg
tacgtggtggccaagaagggccggatctacctgaagcacaactcgatcagcgaggaggtg
ccgatcgtggtggttttgaaggcggcgggcgtggtgagcgacatggagatcatgcagctg
gtgtgcggggacgactcggcgtaccaggacctgttcgcggagaacttcgaggcggcgtcg
cggctcggggtgttcacgcagcggcaggcgttggagttcatcgggcggcgggtgaagacc
gtgcggcggatgaatgccccgcggttgagtgtgctccaggaggggctcgaggccgtggcc
acgacgatctgtgcccacctgacagtggcgcggcgggacttccggcagaaggccgtgtac
atcgctacgatgacccggcgggtggtgatggcgatgcagaacccgaagctcgtggatgac
agggactacgcgggcaacaagaggctcgagttggccggccagttgctctcgttgctgttc
gaggacctcttcaagaagttcaacaacgacttcaaggccaacttggacaagattttgcgg
cggccgagccgggcgtccgagttcgacgccttgctgcacatcaacatccactccaacaac
gtcaccatggggctcaaccgggccatctcgacgggcaactggtccttgaagcggttcaag
atggagcgggccggcgtgacccacgtgttgagccggctctcgtacattgcagcgttgggc
atgatgacccggatcagctcgcagttcgagaagtcgcggaaagtcagcgggccgaggtcc
ttgcagccctcgcagttcggcatgttgtgccccgcggacacgcccgaaggtgcatcgtgc
ggcttggtgaagaacttggccctcatgacgcacatcaccacggacagcgaggaggagccg
atccgccgggcctgcttcatgctcggggcccaggacatcggccaggcggactcccgagcc
ctccacgcccgcggcagcttcggcatctacctcaacggcaccatgatcgccgtcacccgg
tacccgggggccttcgtgcgccgtttccggctgctgcgtcgctccgggcggctcgacgcc
ttcgtgtccatccacaccgacttgcagcaggctgccgtgcacctggcctccgacggcggt
cgaatctgccggcccctgatcatcgtcgaccgcggtgtgtcccgggtgaccgcccggcac
ctcgccttgctccgagacggccgctggggcttcgacgatttcctccgccgcggcctcgtc
gagtacctcgacgtcaacgaggagaacgacgccctcatcgcgttgtacgagcgggacatc
ggccagctcaccacgcacctcgagatcgagccgttcaccgtcttgggggcagtcgcaggc
ctcatcccgtaccctcaccacaaccaatcgccccggaacacgtaccagtgtgccatgggc
aagcaggccatcggggccatcgcgtacaaccagttccggcgtatcgacacgctcctctac
ttgctctgctacccggagcagccgctggttcgaacccggaccatagagcttgtcaagtac
aatcggctgccggcaggccacaatgccaccgtggccgtgatgtcgtactcgggttacgat
attgaggacgcgttgctgttgaaccgggcgtcgatcgaccgcgggttcggacgctgccag
acgttgcggaagaacaccgccttgttgaagcggtacccgaaccacaccaaggacattgtg
gggggaatgcggttggacggttccggccggccgatctaccagcattcggcattgggggga
gacgggttggcggaggtggggtcgatggtgcagagtgggcaggtgatagtgaacaaatgc
gttccgaccgggccgacggggccaggaggaccaagtggaggtggaaattccaccaatccg
agcgggcgaggcccaggaggaggtagaaatggacagagtagagaaagagaaagtgccacc
tcctccttccaggaatctcccctcgtctaccgcggccccgtcccctcatacgtggaccag
gtcatgctcaccgtcggagacaacgaccaggcactaatcaaagtgctcctccggcaaacc
aggcgccccgagttgggcgacaagttctcgtccaggcacggccagaaaggtgtgtgtgga
atgatcatcaagcaggaagacatgccgttcagcgaccagggcatctgcccagacatgatc
atgaacccgcacgggttcccctcgcggatgaccgtcggaaagatgatggaactcgtgtcg
ggcaaggccggcgtgctccggggcaccttcgagtacggaacgtgctttggcggctcggac
ctctcggaaatgtccaagatcttggtttccaagggcttcaactacggcgggaaggacatg
ctctactcgggaaccaccggtgaggccctccaggcctacatcttcttcgggcccatctac
taccagaagttgaagcacatggtgctcgacaagatgcacgccagggccagaggtccccgg
gctgtgctcaccaggcagcccaccgagggtagggcgcgggacggtggtcttcggctcggc
gagatggagcgggactgcttgattgcctacggagcgtctcagctcttgcttgagcggttg
atgttgagctccgatgcctttgatgtcgatatttgccagggctgcggccttatgggctac
aatggctggtgtcctatgtgcaagagcagccagaatgtggtcaagatgaccattccgtat
gctgcgaagcttttgttccaggagctgatttcgatgaacatagcaccgcggttacagttg
ggtgatgtgttttaa
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