Brettanomyces bruxellensis: BRETT_005240
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Entry
BRETT_005240 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
BRETT_005240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbrx03021
]
BRETT_005240
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_005240
Transcription machinery [BR:
bbrx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
BRETT_005240
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
BRETT_005240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_3
zf-CCCH_RBM22
DUF4905
Motif
Other DBs
NCBI-GeneID:
64577163
NCBI-ProteinID:
XP_041134672
UniProt:
A0A7D9CYF6
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All DBs
Position
2:complement(199299..200147)
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AA seq
282 aa
AA seq
DB search
MSIPAKPPSLPRVPNQASVQLSPTPVPVIPMNTNFGGVISNPPMMGDSKIDMSNPEQIAL
EQEYRILIQQMMDKNKNRITFKFEPHLRRQFGFGLDPDRPICPFWNDSNGTMCPYGRDCP
LKHPSKIFKNKIVCKYWLRGLCKMGDDCDFLHEYNLSKMPECAYYAANGVCLQADECIYL
HVDPKSKIPECYNYSNLGFCPEGPKCPRRHVRKVMCPRYLAGFCPKGPECELAHPKFKPG
LLLQSKFNIMTDEEIIAKRLQEMKEAKKEAEGKNAAKADSEH
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataccagcaaaacccccaagtttgccaagagttcccaatcaggcaagcgtacaa
ctttcgcctacgcctgttcccgtaattcctatgaatacaaattttggaggcgtaatctcc
aatcctccaatgatgggtgattccaaaatagatatgtcgaatccggaacaaattgcattg
gagcaggagtaccgaatcttgattcaacaaatgatggataagaataagaataggatcaca
ttcaagtttgagcctcatcttcgacgccagttcggctttgggctcgatccagataggccc
atatgcccattttggaatgattcaaatggtaccatgtgtccatatggcagagattgccca
ttgaagcatccatcaaagatatttaagaacaagattgtgtgcaaatactggctcagagga
ttatgtaagatgggcgacgactgtgattttttgcatgagtacaatctctcaaaaatgcca
gaatgcgcgtattatgctgctaatggcgtctgcttgcaggccgatgaatgcatatatttg
catgttgatccaaagagtaagatccctgagtgttacaattacagcaatttaggattttgt
ccagagggtccaaaatgtcctcgcagacacgttaggaaggtgatgtgtccccggtatctt
gctgggttctgccctaagggtcctgaatgcgagcttgcacatccaaaatttaagccagga
ttgttgctacagtcgaagttcaatattatgactgatgaggagattatagcgaaaaggttg
caggagatgaaggaggccaaaaaggaggctgaaggaaagaatgcagcaaaagcagattct
gagcattga
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