KEGG   Brettanomyces bruxellensis: BRETT_005240
Entry
BRETT_005240      CDS       T07183                                 
Name
(RefSeq) uncharacterized protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
bbrx  Brettanomyces bruxellensis
Pathway
bbrx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bbrx00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    BRETT_005240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbrx03021]
    BRETT_005240
   03019 Messenger RNA biogenesis [BR:bbrx03019]
    BRETT_005240
Transcription machinery [BR:bbrx03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     BRETT_005240
Messenger RNA biogenesis [BR:bbrx03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     BRETT_005240
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_2 Torus zf-CCCH_4 zf-CCCH_DUS3L zf-CCCH_3 zf-CCCH_RBM22 DUF4905
Other DBs
NCBI-GeneID: 64577163
NCBI-ProteinID: XP_041134672
UniProt: A0A7D9CYF6
LinkDB
Position
2:complement(199299..200147)
AA seq 282 aa
MSIPAKPPSLPRVPNQASVQLSPTPVPVIPMNTNFGGVISNPPMMGDSKIDMSNPEQIAL
EQEYRILIQQMMDKNKNRITFKFEPHLRRQFGFGLDPDRPICPFWNDSNGTMCPYGRDCP
LKHPSKIFKNKIVCKYWLRGLCKMGDDCDFLHEYNLSKMPECAYYAANGVCLQADECIYL
HVDPKSKIPECYNYSNLGFCPEGPKCPRRHVRKVMCPRYLAGFCPKGPECELAHPKFKPG
LLLQSKFNIMTDEEIIAKRLQEMKEAKKEAEGKNAAKADSEH
NT seq 849 nt   +upstreamnt  +downstreamnt
atgtcgataccagcaaaacccccaagtttgccaagagttcccaatcaggcaagcgtacaa
ctttcgcctacgcctgttcccgtaattcctatgaatacaaattttggaggcgtaatctcc
aatcctccaatgatgggtgattccaaaatagatatgtcgaatccggaacaaattgcattg
gagcaggagtaccgaatcttgattcaacaaatgatggataagaataagaataggatcaca
ttcaagtttgagcctcatcttcgacgccagttcggctttgggctcgatccagataggccc
atatgcccattttggaatgattcaaatggtaccatgtgtccatatggcagagattgccca
ttgaagcatccatcaaagatatttaagaacaagattgtgtgcaaatactggctcagagga
ttatgtaagatgggcgacgactgtgattttttgcatgagtacaatctctcaaaaatgcca
gaatgcgcgtattatgctgctaatggcgtctgcttgcaggccgatgaatgcatatatttg
catgttgatccaaagagtaagatccctgagtgttacaattacagcaatttaggattttgt
ccagagggtccaaaatgtcctcgcagacacgttaggaaggtgatgtgtccccggtatctt
gctgggttctgccctaagggtcctgaatgcgagcttgcacatccaaaatttaagccagga
ttgttgctacagtcgaagttcaatattatgactgatgaggagattatagcgaaaaggttg
caggagatgaaggaggccaaaaaggaggctgaaggaaagaatgcagcaaaagcagattct
gagcattga

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