KEGG   Brettanomyces bruxellensis: BRETT_005246
Entry
BRETT_005246      CDS       T07183                                 
Symbol
RPB5
Name
(RefSeq) DNA-directed RNA polymerases II 24 kDa polypeptide (RNA polymerase II subunit 5)
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
bbrx  Brettanomyces bruxellensis
Pathway
bbrx03020  RNA polymerase
bbrx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bbrx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BRETT_005246 (RPB5)
  09124 Replication and repair
   03420 Nucleotide excision repair
    BRETT_005246 (RPB5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbrx03021]
    BRETT_005246 (RPB5)
   03400 DNA repair and recombination proteins [BR:bbrx03400]
    BRETT_005246 (RPB5)
Transcription machinery [BR:bbrx03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     BRETT_005246 (RPB5)
  RNA polymerase III system
   RNA polymerase III
     BRETT_005246 (RPB5)
  RNA polymerase I system
   RNA polymerase I
     BRETT_005246 (RPB5)
DNA repair and recombination proteins [BR:bbrx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      BRETT_005246 (RPB5)
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat AAA_3 NA-iREase1
Other DBs
NCBI-GeneID: 64577169
NCBI-ProteinID: XP_041134678
UniProt: A0A7D9H3J9
LinkDB
Position
2:211607..212251
AA seq 214 aa
MEEVDRSTSRLWRAYKTVKEMVKDRGYYIPQEEIDLPLDQFREKFCDSMGVPQRKLMSFQ
ATPTQDALEKYGDLGPLWVEFCDEPSVGIQTMKNFCAHIADKNFSTGIFIYQQNMTPSAT
KAIAVAEPATIEIFQESEIVVNITHHELVPKHIRLSNEEKIDLLKRYRLKESQLPRIQSQ
DPVARYLGLKRGQVVKIIRRSETAGRYASYRICL
NT seq 645 nt   +upstreamnt  +downstreamnt
atggaggaagtagatagatcaacatcaagattgtggagggcatataagacggtaaaggag
atggtgaaagatagaggatactatattccacaagaagaaatagatttaccattagatcag
ttcagagagaagttttgtgactcaatgggtgttccacagaggaagctcatgtcattccag
gcaactccaacacaagatgcattggaaaaatacggagatttgggacctttatgggtggaa
ttctgtgatgagccttctgttggtattcagaccatgaagaatttttgcgcacatatagca
gacaagaacttctcaacaggtatattcatatatcagcagaacatgacaccatcggctaca
aaggccattgctgttgcagaaccggcaactatagaaatcttccaggaatcggaaattgtt
gttaacatcacacatcacgagttggttcctaagcatatcaggctctcaaacgaggagaaa
atcgacttgttgaaaagatacagattgaaggagtctcagttgcctagaattcaaagccag
gatccggttgcaaggtacctaggactaaagagaggacaagttgttaagattattcgacgc
tctgagactgccggtagatatgcttcctacaggatatgtctatag

DBGET integrated database retrieval system