Brettanomyces bruxellensis: BRETT_005328
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Entry
BRETT_005328 CDS
T07183
Name
(RefSeq) uncharacterized protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bbrx
Brettanomyces bruxellensis
Pathway
bbrx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbrx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRETT_005328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrx03019
]
BRETT_005328
Messenger RNA biogenesis [BR:
bbrx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
BRETT_005328
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
BRETT_005328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
64577251
NCBI-ProteinID:
XP_041134760
UniProt:
A0A871R088
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Position
2:join(403756..403778,404032..406168)
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AA seq
719 aa
AA seq
DB search
MSQRRLLQEVDRTFKKVNEGIDEFDYIYDKLLDSDNQSQKEKLEGDLKKEIKKLQRQREQ
IKNWMSGNEVKDSRPLGEYRKKIEHEMERFKEVEKAMKTKAFSNEALLSGKPVLDPKRKE
KAKCCEFLQKNIEELQRQAEVIEAEVDRLSAAMKKHRPSATKQQELDEQDGRLEKHRYHI
RMLEGVMRRLMNDKLDVSQVNSIRDDIEYYVESNDDPEFVEDDDFYEELGDEDMTEVLDG
DSSTADVSHVSSSHSASPQPTLLSATRTHTTNSSTSGIAQPHAPPQVHTQDQNQNQTQPQ
AQAQPATQSVPVAQPATAGAAATPRVQHKVKQRIPSGIKLTSVSFSKPHSVAATHNLASQ
LSHAHHSSPVASAAILSGGLKPAAPVKAPKLKYSEVAAAAVANSTPTARTVHSSGHSTPL
HTASAHLSTTRISSSHQAQPHSQSPAPVSASLSSLTPTKPVQKSSSPVSMAAALDNAVVK
DLASSIKKSVSFLDLSNYTNLPDGFDKYVKDLETAKQRLVEFKDFSGNNAPTQTTVSGSP
ALNHIYEMKLPEFKTIYPQLESSLLNCPDSYDADTPNDYVPTNQFVTQLFFPRDPAVEVT
GSRKLLKKLDLDTLAYCFYYNNLKYKSSFTDIHNSHESRDSRYLQYIAARELHDRSWQYD
RQSKIWYHNDQLSPEASKDSANGGVAVSSWNFFDFKDTWMVKNKPGFKFNENHEERSFL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacgaagacttttacaagaagtggatcgaacgttcaagaaggtgaacgaggga
atagatgagttcgattatatttatgataaacttctggacagtgataaccagtcacagaag
gaaaagttggagggggatctaaagaaagaaatcaagaagcttcagaggcagagagagcaa
attaagaattggatgagcggaaacgaagtgaaagacagccggccgttgggagaatacaga
aagaagatcgagcatgagatggaacgatttaaggaggtggaaaaggcaatgaagacgaaa
gcttttagcaatgaggcacttctttccggaaaaccggttcttgatccaaagagaaaagag
aaagccaaatgttgtgagtttcttcaaaagaacattgaggaattgcaaaggcaggccgag
gtgattgaagcggaggtcgataggttgtctgcagctatgaagaagcacaggcctagtgca
acaaagcagcaggaactggatgagcaggatgggcgattggaaaagcacagatatcacata
cggatgcttgaaggtgtgatgcgaaggcttatgaacgacaaattggacgtatcccaggta
aattccataagagatgacatcgaatactacgtggagtcgaatgatgacccagagttcgtc
gaggatgacgatttctacgaagaattgggtgatgaagacatgactgaagttttggacggt
gattcttcaacggctgacgtttcacacgtctcctcgtcacattctgcatctccacagcct
acattgttgtccgctacccggacacatactacgaattcgtccacatccgggattgcacag
ccacatgcaccgccacaagtgcatacccaggaccaaaaccaaaaccagactcagccacaa
gcgcaagcacagccagcgacccagtcggtccctgtggcacagccagctacagccggtgcc
gctgctactcctagggtgcagcataaagtgaagcagagaataccatctggaataaagctg
acgtccgtttcattctcaaagccgcattctgttgctgctacgcataatctggcatcgcaa
ctttcacatgcacatcattcgtctcccgttgcatcggcagcaattctttcgggcggattg
aagccagctgcacctgtgaaagcaccaaaactcaagtattcagaggtggcagcagcagca
gtcgccaattcgactcctactgcaagaactgttcactcttctggccattccacacctttg
cacacggcctctgcacacttgtcaacaacgagaatctcgtcttctcaccaagcacagccg
cattcccaatccccagcaccggtttcagcttcattgtcgtctcttaccccgacgaagccc
gtgcaaaagtcctccagcccagtttcaatggctgcagccttggataatgctgtggtaaaa
gacttggcaagctccatcaagaagtcggtctcgtttctggacctctcgaattatacaaac
cttccagacggtttcgacaagtacgtgaaagatttggaaactgccaagcagcggcttgtg
gagttcaaagacttttctggcaacaatgcaccgacccaaactacagtgtcgggatccccc
gctctaaaccatatttatgagatgaagctgccggaattcaagacaatctacccccaattg
gagtcatctttgctcaactgcccggactcttacgatgccgatacgccgaatgactatgtt
cctaccaatcagtttgtcacacagctgtttttccccagagatcctgctgtagaagttaca
ggctcccggaaactgctcaagaagctcgatttggacactcttgcttactgtttctattac
aacaatctcaaatacaaatccagcttcaccgacatccacaactcgcatgaaagccgcgat
tcgcgctacctccagtatatagctgctcgagaattacatgatcgcagctggcagtatgac
cgccagtccaaaatctggtatcacaatgatcaattgtctccagaagcttccaaagactct
gcaaatggtggtgttgctgtctctagctggaacttctttgactttaaggacacctggatg
gtcaaaaacaagcctggattcaagtttaacgagaatcatgaggagaggtctttcctctag
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