Borreliella bissettii: BbiDN127_0821
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Entry
BbiDN127_0821 CDS
T01593
Name
(GenBank) S1 RNA binding domain protein
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bbs
Borreliella bissettii
Pathway
bbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BbiDN127_0821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbs03019
]
BbiDN127_0821
03016 Transfer RNA biogenesis [BR:
bbs03016
]
BbiDN127_0821
Enzymes [BR:
bbs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BbiDN127_0821
Messenger RNA biogenesis [BR:
bbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BbiDN127_0821
Transfer RNA biogenesis [BR:
bbs03016
]
Prokaryotic type
tRNA degradation factors
BbiDN127_0821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_KhpA-B
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AEL18968
UniProt:
G0AMP2
LinkDB
All DBs
Position
846345..848495
Genome browser
AA seq
716 aa
AA seq
DB search
MKIGRDELVFETGFMAKQANGSVLATYGGSSVLATVCCSSSVREDLDFVPLSVEYNEKYY
AAGKIPGGFIKREGKPKDKEILVSRLIDRPMRPLFDKRFGREIQVIPTTLATDQLNPPDI
VGMNAAFTAVFLSDIPFNGPIAAVRMVYLNGKFIVNPSFEEIHDSDLDIVVAGSLNGITM
VEGGANEVSEDILLSAIDSAHEYIKQICNAQKEFLDIVGEKEKLPLAFEEKIFEFKEELR
DFVYAELKEACFVKGKLNRDKAITLLRNKSYEHFSSLEKLTDSNESLFHKAFDDFEKEIV
RNSILNDNIRTDGRTPNEIRNIISEVDILSRTHGSALFTRGETQALAVTTLGTSIDEQIM
DDIDGDKRLNFMLHYNFPPFSVGETGRLMTGRREIGHGHLAQRALESMVPGKNDFPYTIR
VVSEILESNGSSSMATVCAGSMSLMSAGVPVKGQVAGIAMGLISEGDKYVVLSDILGEED
HLGDMDFKVAGTKNGITGFQMDIKIENVTKDLMRDALEQARVGRIHILSIMNNVISNSRV
GISKYAPKIVQLQIDIDKISLVIGSTGKTVKAITDEFEVKVQIEQNGKIILFGDDDFKMQ
KAKERIESIVREPKVGEIYEGTVKKINSFGAFIELTPSKEGFLSTRLKPRDSKYGSGRFG
NSNRYSRFGGGSDNIRGNAGLVRPPKLEEGHRIKVRVIDIDKFGKIDLEIVRDKDY
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaataggcagagacgagttagtatttgagactggatttatggctaagcaggctaat
gggtcggttcttgcaacttatgggggatcttcggttcttgcaactgtttgttgttcaagc
agtgtaagagaggatttagattttgttccgctttctgttgaatataatgagaaatattat
gccgctggtaaaattccgggaggatttatcaaaagagagggaaagccaaaggataaagaa
atacttgtttccaggctaatagataggccaatgagacctctttttgataaaagatttggt
cgagaaattcaagtaattcctactactttagctacagatcagctcaatcctccagatatt
gttggaatgaatgctgcttttacagcagtttttttgtcagatattccgtttaacggccca
attgcagctgttagaatggtttatttgaatggtaagtttatagtaaacccttcttttgaa
gagattcatgattctgatcttgatattgttgttgccggaagtttaaatggaattactatg
gtagaaggtggtgctaatgaggttagtgaggatattttgctttcagcaatagatagtgca
catgaatatattaagcaaatttgcaatgctcaaaaagaatttttagatattgtaggggaa
aaggaaaaacttcctttagcttttgaagaaaaaatatttgaatttaaagaggagcttagg
gattttgtttatgcagagcttaaagaagcttgttttgtcaagggaaagcttaatagagat
aaagctataactttactgcgaaataaatcttatgaacatttttcttctcttgagaaattg
actgatagtaatgagtctctttttcataaagcttttgatgattttgagaaggagattgtt
agaaattctattcttaatgataatattagaacagacggcagaacgcctaatgagataaga
aatattatttcagaagttgatattttaagtagaactcatggttctgcgctttttacaaga
ggagagacgcaagctttagcagtaactactcttggtacaagcattgatgaacaaataatg
gatgacattgatggtgataagcgccttaattttatgctccattacaattttccaccattt
tcagttggtgagactggtagacttatgactggcaggcgcgagattggccatggtcatttg
gctcaaagagctttagaatcaatggttcctgggaaaaatgattttccttatactattagg
gtagtttctgagattttagagtctaacggatcttcttcaatggctactgtttgtgctggg
agcatgtctttaatgtcagcgggggttcctgttaaagggcaagttgcaggaatagctatg
gggcttattagcgaaggtgataaatatgtagttttaagtgatattcttggagaagaagat
catttaggcgatatggactttaaagtggctggtactaaaaatggaatcactggatttcaa
atggatattaagattgaaaatgttactaaagatttgatgagagatgctcttgagcaggca
agagtaggtagaatacatatattatctattatgaataatgtaatttctaattcaagagtt
ggtatatctaagtatgctcccaaaattgttcaacttcaaattgacattgacaagatatct
cttgttataggatctactggaaaaaccgttaaggctataacagatgaatttgaagttaag
gttcaaattgagcagaatggaaaaattattcttttcggggatgatgattttaagatgcaa
aaggctaaagaaagaatagagagtattgtaagagagccaaaggtaggcgaaatttatgaa
ggaactgttaaaaaaattaatagttttggggcttttattgaacttaccccttcaaaagaa
ggatttttaagtactcgtttgaaacctagagacagtaagtatggttctggaagatttgga
aatagcaatagatattctagatttggtggcggctcagataatataaggggtaatgcaggg
ttagttcgacctccaaaattagaagaaggtcatcgaattaaagttagagtaattgatata
gacaaatttggaaaaattgatcttgaaattgttagagataaagattattaa
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