Bradyrhizobium sp. BTAi1: BBta_0062
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Entry
BBta_0062 CDS
T00528
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bbt
Bradyrhizobium sp. BTAi1
Pathway
bbt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBta_0062 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbt03019
]
BBta_0062 (pnp)
03016 Transfer RNA biogenesis [BR:
bbt03016
]
BBta_0062 (pnp)
Enzymes [BR:
bbt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BBta_0062 (pnp)
Messenger RNA biogenesis [BR:
bbt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BBta_0062 (pnp)
Transfer RNA biogenesis [BR:
bbt03016
]
Prokaryotic type
tRNA degradation factors
BBta_0062 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
OB_RRP5_4th
S1_RRP5
KH-I_KHDC4-BBP
Tricorn_2nd
DUF5813
Motif
Other DBs
NCBI-ProteinID:
ABQ32364
UniProt:
A5E870
LinkDB
All DBs
Position
63789..65951
Genome browser
AA seq
720 aa
AA seq
DB search
MFTKHSVEIDWGGRPLKLETGKIARQADGAVVATYGETVVLATVVAAKSPREGVDFLPLT
VDYQEKAYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDAWRNETQVIVTTLSH
DMENDPDILAMVAASAALTLSGVPFKGPIGAARVGFANDEYILNPTLDEMTDTQLDLVVA
GTSDAVLMVESEAKELNEDIMLGAVMFGHRHFQPVINAIIELAEKAAKEPRDVAIIDNSA
IEKEMLGIAEQDLRKAYAIPVKQERYAAVAAVKEKVMAYFFPEGQEPKYEKLRVADVFKE
LEAKIVRWNILDTGRRIDGRDVKTVRNIVCEVGVLPRAHGSALFTRGETQALVVTTLGTG
EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH
EFPYTTRVVSEVTESNGSSSMATVCGSSLALMDAGVPLKRPTAGIAMGLILEGSRYAVLS
DILGDEDHLGDMDFKVAGTESGITSLQMDIKIEGITEEIMRVALGQAREGRIHILGEMSK
ALTAARAELGEYAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
SDGEAMKAAIKWIKSIASDPEIGQIYDGTVVKVMEFGAFVNFFGTRDGLVHISQLADKRV
QKTTDVVKEGDKVKVKLLGFDDRGKTRLSMKAVDQTTGEDLEAKQKAEGGAEAPREAAGE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccaagcattccgtcgagatcgactggggtggacgtccgctcaagcttgaaacc
ggcaagatcgcccgccaggccgacggcgccgtcgtcgccacctatggcgagaccgtcgtg
ctcgccaccgtcgtggccgccaagtcgccgcgcgaaggcgtcgacttcctgccgctgacc
gtcgactatcaggaaaaggcctatgcggccggtcgcatccccggcggctatttcaagcgt
gaaggccgtccgaccgagaaggagacgctggtctcccgcctgatcgaccgcccgatccgt
ccgctgttcgtcgacgcctggcgcaacgagacccaggtgatcgtgaccaccctgtcgcac
gacatggagaacgatccggacatcctggcgatggtcgcagcctccgcagcgctgaccctg
tcgggcgtgccgttcaagggcccgatcggcgccgcgcgcgtcggcttcgccaatgacgaa
tacatcctcaatccgaccctcgacgagatgaccgacacccagctcgatctggtcgtcgcc
ggcacctcggacgcggtgctgatggtggaatcggaggccaaggagctcaacgaggacatc
atgctcggcgcggtgatgttcggtcaccgtcacttccagccggtgatcaacgcgatcatc
gagctcgccgagaaggccgccaaggagccgcgcgacgtcgcgatcatcgacaacagcgcg
atcgagaaggaaatgctgggcatcgccgagcaggacctgcgcaaggcctatgcgatcccg
gtcaagcaggagcgctacgccgccgtcgccgcggtcaaagaaaaggtgatggcctacttc
ttcccagaagggcaggagccgaaatacgagaagctgcgcgttgccgacgtgttcaaggag
ctggaagcgaagatcgttcgctggaacatcctggacaccggccgccgcatcgacggccgc
gacgtcaagaccgtccgcaacatcgtgtgcgaggtcggcgtgctgccgcgcgcccacggc
tcggcgctgttcacccgcggcgagacccaggcgctggtcgtgaccacgctcggcaccggc
gaggacgagcagtatatcgacgcgctgtcgggaacgtacaaagagacgttcctgctgcac
tacaacttccctccctattcggtcggtgagaccggtcgtctcggcggcaccaagcgccgc
gagatcggccatggcaagctggcctggcgcgcgatccacccggtgctgccgccgcatcac
gagttcccctacaccacccgcgtggtgtcggaggtgaccgagtccaacggctcgtcgtcg
atggccaccgtctgcggctcgtcgctggcgctgatggatgccggcgtgccgctgaagcgg
ccgaccgccggcatcgcgatgggtctgatcctggaaggcagccgctacgcggttctgtcg
gacatcctcggcgacgaggatcatctcggcgacatggacttcaaggtcgcgggcaccgag
agcggcatcacctcgctgcagatggacatcaagatcgagggcatcaccgaggagatcatg
cgggttgcgctgggccaggcccgcgaaggccgcatccatatcctgggtgaaatgtccaag
gcgctgaccgctgcgcgcgccgagctcggcgaatacgcgccgcgcatcgaaaccttcaag
atcccgaccgacaagatccgcgaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgagaagaccggcgccaaggtcaacatcgaggacgacggcaccgtcaaggtcgcctcg
agcgatggcgaggcgatgaaggccgccatcaagtggatcaagtcgatcgcctccgatccg
gagatcggccagatctatgacggcaccgtcgtcaaggtgatggagttcggcgccttcgtg
aacttcttcggcacccgcgacggcctcgtccatatctcgcagctcgccgacaagcgcgtg
cagaagaccaccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggcttc
gacgatcggggcaagacccgcctgtcgatgaaggcggtcgaccagaccaccggcgaagac
ctcgaagccaagcagaaggccgaaggcggcgccgaggcaccgcgtgaggccgctggcgag
taa
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