Bradyrhizobium sp. BTAi1: BBta_0372
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Entry
BBta_0372 CDS
T00528
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bbt
Bradyrhizobium sp. BTAi1
Pathway
bbt00300
Lysine biosynthesis
bbt00470
D-Amino acid metabolism
bbt01100
Metabolic pathways
bbt01110
Biosynthesis of secondary metabolites
bbt01120
Microbial metabolism in diverse environments
bbt01230
Biosynthesis of amino acids
Module
bbt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bbt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BBta_0372 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BBta_0372 (dapF)
Enzymes [BR:
bbt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BBta_0372 (dapF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
DUF2924
Motif
Other DBs
NCBI-ProteinID:
ABQ32659
UniProt:
A5E915
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All DBs
Position
371086..371955
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AA seq
289 aa
AA seq
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MSALANHSFVKMNGIGNEIVVLDLRDVKHVVTPDEARAVAARVPYDQLMVLQPPRLDGTE
AFIRIYNNDGSESGACGNGMRCVVRQVFEKTGQASATFETRAGLLNCWQGPAPDLYTVDM
GVPKFGWQEIPLAEEFRDTRYIELQIGPIDAPILHSPSVVNMGNPHAVFWVDGDVNSYDL
ERFGPLLENHPIFPERANITLAHIVDRDHITMRTWERGAGLTKACGSAACATAVAAARLK
RANRIVQMTLPGGELTIEWRERDDHVLMTGTATFEFEGRFEPQLFASVA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctggccaaccacagcttcgtcaaaatgaacgggatcggcaacgagatcgtc
gtgcttgatctgcgtgacgtgaagcatgtggtcacgcccgacgaggcgcgggcggttgca
gcccgcgttccctacgaccagttgatggtgctgcagccgccccggctcgacggcaccgag
gcgttcatccgcatctacaacaatgacgggtcggagtccggcgcctgcggcaacggcatg
cgctgcgttgtccggcaggtgttcgagaagaccggccaggccagcgcgaccttcgagacc
cgtgccggactcttgaactgctggcaggggcccgcgcccgacctctacaccgtcgacatg
ggtgtgccgaaattcggctggcaggagattcccctggccgaggagttccgcgacacccgc
tatatcgagctgcagatcgggccgatcgatgcgcccatcctgcactcgccctcggtcgtc
aacatgggcaatccgcacgcggtgttctgggtggacggcgacgtcaactcctatgacctg
gagcggttcggaccgctgctggagaaccacccgatcttcccggagcgcgccaacatcacg
ctcgcccacatcgtcgatcgcgatcacatcacgatgcgcacctgggagcgcggcgcgggg
ctgacgaaggcctgcggctcggcggcctgcgccacggcggtcgcggccgcccggctgaag
cgggccaatcgcatcgtccagatgaccttgcccggtggcgagctgacaatcgaatggcgc
gagcgcgacgatcacgtgctgatgacgggcaccgcgaccttcgagttcgagggccggttc
gagccacagctgttcgccagcgtggcatga
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