Bradyrhizobium sp. BTAi1: BBta_3132
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Entry
BBta_3132 CDS
T00528
Symbol
speF
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
bbt
Bradyrhizobium sp. BTAi1
Pathway
bbt00330
Arginine and proline metabolism
bbt00480
Glutathione metabolism
bbt01100
Metabolic pathways
bbt01110
Biosynthesis of secondary metabolites
bbt04148
Efferocytosis
Module
bbt_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
bbt00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
BBta_3132 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
BBta_3132 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
BBta_3132 (speF)
Enzymes [BR:
bbt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
BBta_3132 (speF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ABQ35247
LinkDB
All DBs
Position
complement(3280693..3283050)
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AA seq
785 aa
AA seq
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MEYFRRFTFLFAAPVFETDDLAGLRFNQIIEEIQRSGFEVVRARKLEDAEIAVQTDAAIG
CMVVDWGKKGLEGKTAALINLMRRRGLDFPIILLIRRKRFEDLPVEVLDFIDGYVFLSEE
TPAFIAKNLISRLKQYAETLKTPFFGTLVDYAEEGNQLWTCPGHNGGVFYSRSPIGRIFV
EHLGEAVFRDDLDNSVLDLGDLLTHEGPALRAQKEAAQIFGAEKTYFVLNGTSTSNKVVL
GALVTDGDLVLFDRNNHKAAHHGALLISGGVPVYVPTVRNAWGLIGPMRWDLLDEEQLRQ
QIRNNPLVKDPEAWRKERPFRVAIVEQCTYDGTIHSAEMILQRIGHLCDYIMFDEAWAGF
MKFHPLYAGRFAMGLAELGPDAPGIIATQSTHKQLASFSQASQIHIKDRHIKGQRRRVEH
RRFNESFMQHASTSPFYPLFASLDVGAQMMKGRSGEVLWDDTIRLGIELRKKIRAMRREF
EEKEKDPARRWFFEPFVPDRVSIPDAASPGGRHDVAWEAISTDQLATDAALWQLAPGEAW
HGFPDLAPGFAMTDPNKLTLLTPGFDRTTGGYADHGIPAPIVAQYLRENRIVAEKNDLNS
LLFLLTPGVEASKAGTLISGLVAFKRLHDDNVLLEDAIPEFTRRRFGRYGKVRLRDLCGE
MHRFYREAEVSALQARQFQPQHLPEIAMSPREAARALMRNEVDYLPIAQIDGRIATTPFV
VYPPGIATIVPGERLSDRARPMIDYLKMFERAFNTFPGFDVEIQGLYKEIDEAGRIRLHT
YVCAE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggaatacttccgccgcttcaccttcctgttcgccgcgcccgtgttcgagaccgacgat
ctcgccggcctgcgcttcaaccagatcatcgaggagatccagcgctcgggtttcgaggtc
gtgcgcgcccgcaagctggaggatgccgagatcgcggtgcagaccgatgccgcgatcggc
tgcatggtggtggactggggcaagaaagggctggagggcaagacggcggcgctgatcaac
ctgatgcggcggcgcggtctggatttcccgatcatcctcttgattcgccgcaagcggttc
gaggacctgccggtcgaggtgctcgacttcatcgacggctacgtgttcctgtccgaggaa
acgccggcgttcatcgccaagaacctgatcagccggctgaagcaatatgccgagaccttg
aagacgccgttcttcggcacgctggtcgactatgccgaggaaggcaaccagctctggacc
tgccccggccataatggcggcgtgttctatagccgcagcccgatcggccggatcttcgtc
gagcatctcggcgaagccgtgttccgcgacgatctcgacaattccgtgctcgatctcggc
gacctgctgacccatgagggtccggcgctgcgcgcgcagaaggaagcggcgcagatcttc
ggcgccgagaagacctatttcgtcctcaacggcacctcgacctccaacaaggtggtactg
ggcgcgctggtgaccgacggcgacctcgtgctgttcgaccgcaacaatcacaaggccgcc
catcatggcgcgctgctgatctccggcggcgttccggtctatgttcccaccgtccgcaat
gcctgggggctgatcgggccgatgcgctgggatctgctcgacgaggagcagttgcggcag
cagatccgcaacaacccgctggtgaaggaccccgaggcctggcgcaaggaacggccgttc
cgcgtcgccattgtcgagcagtgcacctatgacggcacgatccacagcgccgaaatgatc
ctgcagcgcatcggccatctctgcgactacatcatgttcgacgaggcctgggcgggcttc
atgaaattccacccactctatgccggccggttcgccatgggacttgccgagctcgggccc
gacgcccccggcatcatcgccacgcaatcgacccacaagcagctcgcgagcttctcgcag
gcgtcgcagatccacatcaaggatcgccacatcaagggtcagcgccgccgggtcgagcat
cgccgcttcaacgaaagcttcatgcagcacgcctcgacgtcgccgttctatccgctgttc
gcctccctcgacgtcggcgcgcagatgatgaagggccgctccggcgaagtcctgtgggac
gacacgatccggctcgggatcgaattgcgcaagaagatcagagcgatgcgccgggaattc
gaggaaaaggagaaggatccggcgcggcgctggttcttcgagccgttcgtgcccgaccgg
gtgtcgatccctgacgccgccagcccgggcgggcggcatgacgtggcctgggaggcgatc
tcgaccgatcagctcgcgaccgacgccgcgctgtggcagctcgcgccgggcgaagcatgg
cacggctttccggatctcgcgcccggcttcgccatgaccgatccgaacaagctcacgctg
ctcacgccgggcttcgaccgcaccaccggcggctacgccgaccacggcatcccggcgccg
atcgtcgcgcaatatctgcgcgagaaccgcatcgtggccgagaaaaatgacctcaactcg
ctgctcttcctgttgacccccggcgtcgaggccagcaaggccggcaccctgatcagcggg
ctcgtcgccttcaagcggctgcacgacgacaatgtgctgctggaggacgccattcccgag
ttcacccggcgccgcttcggccgctacggcaaggtgcggctgcgcgacctctgcggcgag
atgcaccggttctaccgcgaggccgaggtgagcgcgctgcaagccaggcagttccagccg
cagcatctgccggagatcgcgatgtcgccgcgcgaggcggcgcgtgcgctgatgcgcaac
gaggtcgactatctgccgatcgcccagatcgacggacgcatcgcgacgacgcccttcgtg
gtgtatccgccgggcattgccaccatcgttccgggcgagcggctgtccgaccgcgcccgg
ccgatgatcgattacctcaagatgttcgaacgcgccttcaacacgtttccgggcttcgac
gtcgagattcagggattgtacaaggagatcgacgaagctggccggattcggctccatacc
tatgtttgcgcagagtaa
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