Bradyrhizobium sp. BTAi1: BBta_3626
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Entry
BBta_3626 CDS
T00528
Name
(GenBank) putative sigma-54-dependent transcriptional regulator, HTH Fis-type family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bbt
Bradyrhizobium sp. BTAi1
Brite
KEGG Orthology (KO) [BR:
bbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbt03000
]
BBta_3626
Transcription factors [BR:
bbt03000
]
Prokaryotic type
Helix-turn-helix
Other families
BBta_3626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
HTH_23
HTH_30
HTH_7
HTH_28
AAA_5
PAS_4
AAA
HTH_29
PAS_8
HTH_22
AAA_2
PAS
HTH_IclR
Sigma70_r4
HTH_1
AAA_16
HVO_A0261_N
HTH_17
PAS_7
HTH_Tnp_1
HTH_36
NUMOD1
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ABQ35712
LinkDB
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Position
complement(3791715..3793595)
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AA seq
626 aa
AA seq
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MLPASRRLDGAWLKLDDEGHPPAGLMSADIYDSWMRCITLGLDALRPPSPEFVDAAVLRQ
EQQRCSLVRGLALAEMHTLHQQIAGSNFMIAFATAEGLLLDSISDSSFSDASDAACIRAG
SIWTESICGTNGLGTAAYLKRPIVVHGREHFFARYNNLTCVAAPIFAPDGEVAGILDASS
DCMSRQAHTQALVAMAATQIENGLFREQHRGNILIAFHNRGEYLHTLSAGLLAVDNDGRI
LAANRAARVLLHGLPAFAGRLFGDVFRGRFSDFVDEGRRKERQRLEDDVGSQFVATIENS
RQFPMTHRVLAPRPAPPKSPAAAFVSADPRIAAIVQRVAIAAARKMPILIRGETGTGKEQ
MARHAHAASQRAGSFVAVNCAALPDSLIEAELFGYTEGAFTGARKGGSAGLFKEADGGTL
FLDEIGDMPVTLQAVLLRFLDDWTVRPVGGSKREVDVLLVSATNANLDDAIAKGRFRSDL
LFRLNTLEVTLLPLRERTDFADIARHLMAKIDPSIALSEAAIQRLAQRSWDGNIRELRNV
LARLSLSETGPVIDAATVDAAIGPGSAEPVAPKIKMNESAPADLHEIQRALVLATFAETG
NNISKTARRLGISRNTVYRALRGKPG
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctgccagccggcgcctcgatggcgcgtggttgaagctcgacgatgaggggcat
ccgccagccggtctgatgtcggccgacatctacgacagctggatgcgctgcatcacgttg
ggtctcgatgcgctgcgtccgccctcgcccgaattcgtcgatgccgccgtgctgcggcag
gagcagcaacgctgctcgctggtgcgcggcctcgctttggccgagatgcacacgctgcat
cagcagatcgccggctccaatttcatgatcgcgtttgccaccgccgaagggcttctgctc
gacagcatctcggattccagcttcagcgatgcgtcagatgccgcctgcatccgcgcgggc
tcgatctggaccgagagcatctgcggcaccaatgggctcggcacggcggcctatctgaag
cggccgatcgtcgtgcacggccgcgagcactttttcgcccgctacaacaacctgacctgc
gtggcggcgccgatcttcgcgcccgacggcgaggtcgccggcatcctcgacgcgtcgtcc
gattgcatgtcgcgccaggcgcacacacaggcgctggtggcgatggccgcgacccagatc
gagaacgggctgttccgcgagcagcatcgcggcaacatactgatcgccttccacaaccgc
ggcgaatatctgcacacgctgagcgccggcctgctggccgtcgacaatgacggccggatt
ctcgccgccaaccgcgccgcgcgtgtgctgctgcacggcctgccggccttcgccggccgc
ctgttcggcgatgtgttccgtggccggttcagtgacttcgtcgacgagggccggcgcaag
gagcgacagcggctcgaggacgatgtcgggagccagttcgtcgcgacgatcgagaacagc
cgccagttcccgatgacgcatcgcgtgctggcaccacggcccgcgccgccgaagagcccg
gcggcggcgttcgtctccgccgatccgaggatcgcggccatcgtgcagcgcgtcgccatc
gccgccgcgcgcaagatgccgatcctcattcgcggcgagaccggcaccggcaaggagcag
atggcacggcacgcccatgcggcgagccagcgcgccggctccttcgtcgccgtcaattgc
gccgcccttcccgacagcctgatcgaggccgagctgttcggctatacagaaggcgccttc
accggtgccaggaaaggcggctcggccggcctgttcaaggaggccgatggcggcacgctt
tttctcgacgagatcggcgacatgccggtgacgttgcaggcagtgctgctgcgcttcctc
gacgactggacggtgcggccggtcggcggcagcaagcgcgaggtcgacgtgctcctggtg
tcggccaccaacgccaatctcgacgacgcgatcgccaaaggccgcttccgatccgacctg
ctgtttcgcctcaacacgctcgaagtgacgctgctgccgctgcgcgagcgcaccgacttc
gccgacatcgcccgccatttgatggcgaagatcgatccgtcgatcgcactgtccgaggct
gccattcagcggcttgcacagcggagctgggacggcaacatccgcgagcttcgcaacgtc
ctggcgcggctgtcgctcagcgagaccggcccggtaatcgacgccgccaccgtcgacgcc
gccatcggacccggcagcgccgagcccgtcgcgccaaagatcaagatgaacgaaagcgca
ccggccgacctgcacgagatccagcgcgccctcgtgctcgccaccttcgcggagaccggc
aacaatatcagcaagacggcgcggcggctcggcatctcgcgcaacaccgtctatcgcgcg
ctgcgcggcaagccgggctga
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