Bradyrhizobium sp. BTAi1: BBta_3637
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Entry
BBta_3637 CDS
T00528
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bbt
Bradyrhizobium sp. BTAi1
Brite
KEGG Orthology (KO) [BR:
bbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbt03000
]
BBta_3637
Transcription factors [BR:
bbt03000
]
Prokaryotic type
Helix-turn-helix
Other families
BBta_3637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
HTH_30
HTH_23
AAA_5
HTH_28
HTH_29
AAA_2
HTH_Tnp_1
HTH_Tnp_Tc3_1
HTH_22
AAA_16
HTH_7
Phage_NinH
Mor
HTH_17
HTH_38
Sigma70_r4
HTH_Tnp_ISL3
HTH_11
NUMOD1
TrmB
Motif
Other DBs
NCBI-ProteinID:
ABQ35723
RhizoBase:
BBta_3637
UniProt:
A5EHS9
LinkDB
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Position
complement(3803956..3805896)
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AA seq
646 aa
AA seq
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MDQRDVRAAWQKFVERGTLSGDVRSTVAASWQRSRQHSVTVDRAKAPLVAEAELFRQRAK
HAALRQAARCALQNSRTFLSDAGSIMILTDPTGLIIDTQGDARVIDAGRAVHLEHGGRWS
EADIGTNAIGAALADSCPVQIHGAEHFCTEVQRWTCAAVPVHDPSDGELLGVVDISGPAS
TFNPQSLALAVAVGHHVESVLAQLARQDKEQLLCDFIAKRASWATEECILLDRRGAILHA
TERGLRAMKDNGLNTDGDAPTRFLKTVAFEDWPAKLKEILPHASFELVKNGSTGVGAIVV
MHTRRRAPGERGAVAIRGRDAALPAAPSHHAQASQPPATSAGNKRPRFVAEDPNVLAIVR
RVESAAARKMPILIRGETGTGKEQLARHAHAASRRSGAFVAVNCAALPDSLIEAELFGYA
DGAFTGARSGGAIGLVKEADGGTLFLDEIGDMPVALQGVLLRLLDDWTVRPVGGSAFKVD
VFLVSATNAALDKAIAEGRFRSDLLYRLNTLEVRLPRLRERCDFDAIARQLLHKIDPGCD
ITAEALARLASNHWHGNIRELGNMLARLTLGVSNGLIDEACVDAMIGHVIGQVIARPPQD
TGSLHDVQRARILMVYAETNGNVSETARRLGVSRNTIYRALGQPRP
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggaccaacgcgacgtacgggccgcatggcaaaaattcgtcgagcgcggcaccttgtcg
ggcgacgtgaggtcgacagtggccgcttcgtggcagcggtcgcggcagcacagcgtcacg
gtcgatcgggcgaaggcgccgctcgtcgccgaggctgaattgtttcgccagcgcgccaag
cacgcggcgcttcgccaggccgcgcgttgcgcgctgcagaactccaggacgttcctgagc
gacgccggctcgatcatgatcctcactgatcccaccggcctgatcatcgacacccagggc
gatgccagggtcatcgatgccggtcgcgcagtgcatctcgagcacggcgggcgctggagc
gaggccgacatcggcaccaacgcaatcggcgcggcgctggccgactcgtgcccggtgcag
attcacggcgccgagcatttctgcaccgaggtccagcgctggacctgcgccgccgtcccg
gttcacgatccgagcgatggcgagctgctcggcgtcgtcgacatctccggtcccgccagc
acgttcaatccgcagagcctggcgctggcggtggcggtcggccatcacgtcgagagcgtg
ctggcgcagctggcgcggcaggacaaggagcagctgctgtgcgacttcatcgccaagcgc
gcgtcctgggcgaccgaggaatgcatcctgctcgaccgccgcggcgccatcctgcatgcg
accgagcgcgggctgcgcgccatgaaggacaacggtctcaacaccgacggcgacgcaccg
acgcggttcctgaagacggtcgcgttcgaggactggccggcgaagctcaaggagatcctg
ccgcatgcgagcttcgagctggtcaagaacggcagcacgggtgtcggcgcgatcgtcgtg
atgcacacccgccgccgcgcccccggagagcgcggtgcggtggccatccgcgggcgcgac
gccgcgcttccggcggcgccgtcgcaccacgcgcaggcctctcagccgccggcgacgtca
gccgggaacaagaggccccgatttgttgccgaagacccgaacgtgctcgcgatcgtccgg
cgcgtggagagcgcggcggcgcgcaagatgccgatcctgatccgcggtgagaccggaacc
ggcaaggagcagctggcgcgccatgcccacgctgccagccgccgttccggcgccttcgtc
gcggtcaattgcgccgccctccccgacagcctgatcgaggccgaactgttcggctatgcc
gatggcgcgttcacgggcgcgcggtccggcggcgccattggtctggtcaaggaggccgat
ggcggcacgctgtttctcgacgagatcggcgacatgccggttgcgctgcagggcgtactg
ctgcgcctgctcgatgactggacggtgcggccggtcggcggcagcgcgttcaaggtcgac
gtcttcctggtgtcggcgaccaacgctgcgctggacaaggcgatcgccgagggacgcttt
cggtccgacctgctctatcggctcaacacgctcgaggtgcggctgccgcggctgcgcgag
cgctgcgatttcgacgccattgcgcggcagctgctgcacaagatcgatccgggctgcgac
atcacggcggaggcgctggcgcggctggcgtcgaaccattggcacggcaacatccgcgag
ctcggcaacatgctggcgcggctcacgctcggtgtctccaacgggctgatcgacgaggcc
tgcgtcgatgccatgatcggccacgtcatcggtcaagtgatcgcgcggccgccgcaggac
acaggatcgctgcacgacgtccagcgcgcccgcatcctgatggtctatgcggagaccaat
ggcaatgtcagcgaaaccgcgcgccgtctcggcgtgtccaggaacacgatctatcgcgcg
ctcggccagccgcggccataa
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