Bradyrhizobium sp. BTAi1: BBta_4438
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Entry
BBta_4438 CDS
T00528
Symbol
xthA2
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bbt
Bradyrhizobium sp. BTAi1
Pathway
bbt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBta_4438 (xthA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbt03400
]
BBta_4438 (xthA2)
Enzymes [BR:
bbt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BBta_4438 (xthA2)
DNA repair and recombination proteins [BR:
bbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BBta_4438 (xthA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ABQ36474
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All DBs
Position
4648948..4649739
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AA seq
263 aa
AA seq
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MRIATWNVNSVRQRIEHLVTWLKECSPDIVCLQEIKCTDDAFPRLEIEALGYNVVTHGQK
TFNGVALLSKLPFDETRSGLDGDVEDVHARFLEGVVSLKHGVVRIACLYLPNGNPPNTEK
YPYKLKWMSRLRDYTRERLKTEEPLILAGDFNVIPAAADVSNPEAWVEDALFRPETRESF
QALLGLGLTDALRAVTDAPGQYTFWDYQAGAWQKNAGIRIDHLLLSPQASDRLVEVGIDS
YVRAWEKPSDHVPVWADFDLETA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacctggaacgtcaattcggtccggcaacggatcgagcacctcgtgacc
tggctcaaggagtgctcgcctgacatcgtctgcctgcaggagatcaaatgcacggacgat
gcgttcccgcggctggagatcgaggcgctgggctacaatgtggtcacccacggccagaag
accttcaacggcgtcgccctgctgtcgaagctgccattcgacgaaaccagatccgggctc
gatggcgatgtcgaggacgtgcatgcgcggttcctcgaaggcgtggtcagcctgaagcac
ggcgtggtgcgcatcgcctgcctctatctgcccaacggcaatccgccgaacacggagaaa
tatccctacaagctcaaatggatgtcgcggcttcgtgactatacgcgtgaacggctgaag
accgaggagccgctgatcctcgcaggcgacttcaacgtcatcccggcggcggcggatgtc
tccaatcccgaggcctgggtcgaggacgcgctgttccggccggagacgcgcgagagtttt
caggcgctgctcggcttggggctcaccgacgcgctgcgcgccgtcaccgatgcgccgggg
cagtacacgttctgggactatcaggccggcgcctggcagaagaatgcagggatccgcatt
gatcacctgttgttgtccccacaggccagcgaccggctggtcgaggtcggcatcgacagc
tacgtcagggcctgggagaagccgtccgatcatgtgccggtgtgggccgatttcgatctc
gagacggcgtga
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