Bradyrhizobium sp. BTAi1: BBta_4733
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Entry
BBta_4733 CDS
T00528
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bbt
Bradyrhizobium sp. BTAi1
Brite
KEGG Orthology (KO) [BR:
bbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbt03032
]
BBta_4733 (topA)
03400 DNA repair and recombination proteins [BR:
bbt03400
]
BBta_4733 (topA)
Enzymes [BR:
bbt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BBta_4733 (topA)
DNA replication proteins [BR:
bbt03032
]
Prokaryotic type
DNA Topoisomerases
BBta_4733 (topA)
DNA repair and recombination proteins [BR:
bbt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BBta_4733 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ABQ36759
UniProt:
A0ABF7Q8A9
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All DBs
Position
4959842..4962592
Genome browser
AA seq
916 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDENFRMIWEVDPKAAG
RLNDIAKSLKNADRLILATDPDREGEAISWHVLEVLKEKRALKDQKIERVVFNAITKQAV
SEAMKHPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVPREYWSLIATLATPRGDTFEARLVGADGKKIQRLDIGTGAEAEDFKQALNAA
SYTVATVDAKPARRNPQAPFTTSTLQQEASRKLGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIDGSAITQARKVIGEIYGNKYVPDSPRQYQTKAKNAQEAHEAIRPTDLSR
KPADLRKRLDDDQAKLYELIWTRTIASQMESAELERTTVDIIAKAGGRTLELRATGQVVK
FDGFLALYQEGRDDEEDEDSRRLPQMSPNEPLKRQNLAVTQHFTEPPPRFSEASLVKRME
ELGIGRPSTYASILDVLKARGYVKLEKKRLHGEDKGRVVIAFLENFFRRYVEYDFTADLE
EQLDRISNNEIAWQQVLKDFWTGFIGAVDDIKDLRVAQVLDALDEMLGPHIYPPRADGGD
VRQCPTCGTGRLNLKAGKFGAFVGCSNYPECRYTRPLAADSEAAADRILGQDPDSGLDVA
VKAGRFGPYIQLGEQKDYAEGEKPKRAGIPKGTQPSDVDLDLALKLLSLPREIGKHPETG
LPITAGLGRFGPFVKHDKTYASLEAGDEVFDIGLNRAVTLIAEKVAKGPSKRFGADPGKA
LGDHPSLGPVAVKAGRYGAYVTAGGVNATIPGDKEKDTITLAEAIALLDERAAKGGGKAK
GAKKAAKPAKAAAKPKAGGDDDSPKPAKKAVAKKAATKPKSESTSKARAPVAKAAKTSAK
PATKATPKKSAGKARG
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgtcatcgtggagtcgcctgcaaaggccaagacgatcaataaatatctgggc
tcctcctacgaggttctggcctcttttggtcatgtccgcgaccttccggccaagaacggt
tcggtcgatccggacgagaatttccggatgatctgggaggtcgaccccaaggctgccggc
cgactcaacgacatcgccaaatcgctcaagaatgcagaccgactgattctcgccactgac
cccgatcgtgagggagaggcgatctcctggcacgtgctcgaagtgttgaaggagaagcgc
gcgctcaaggatcagaagatcgagcgcgtggtcttcaacgccatcaccaagcaggccgtg
tcggaggcgatgaagcatccgcgccagatcgacggcgcgctggtcgacgcctatatggcg
cgccgcgccctcgattacctcgtcggcttcacgctctcccccgtgctgtggcgcaagctg
ccgggcgcgcgctcggccgggcgcgtgcagtcagtggcactgcgccttgtgtgcgatcgc
gagctcgagatcgagaagttcgttccgcgcgaatattggtcgctgatcgccacgctggcg
acgccgcgcggcgacacgttcgaagcgcggctggtcggcgccgacggcaagaagatccag
cggctcgacatcggcaccggcgcggaagccgaagacttcaagcaggcgctgaacgcggcg
agctacacggtcgccaccgtcgatgccaagccggcgcggcgcaatccgcaggccccgttc
accacctcgacgctgcagcaggaggcgagccgcaagctcggcttcgcgccggcgcacacg
atgcgcattgcgcagcgtctctatgaaggcatcgacatcggcggcgagaccaccggtctc
atcacctatatgcgaaccgacggcgtgcagatcgacggctcggcgatcacccaggcgcgc
aaggtgatcggcgagatctacggcaacaaatatgtgccggacagcccgcgccagtaccag
accaaggccaagaacgcccaggaagcgcacgaggcgatccgcccgaccgatttgtcgcgc
aagcccgcggacctgcgcaagcggctcgatgacgaccaggccaagctctatgagctgatc
tggacccgcaccatcgccagccagatggagtcggccgagctcgagcgcaccaccgtcgac
atcatcgccaaggcaggcggtcgcacgctggaactgcgcgccaccggccaggtcgtcaag
ttcgacggcttcctcgcgctctatcaggaaggccgcgacgacgaggaggacgaggacagc
cgccgactgccgcagatgagcccgaacgagccactgaagcgtcagaacctcgcggtcact
cagcacttcaccgagccgccaccacgcttctcggaagcctctctggtcaagcgcatggag
gaactcggcatcggccggccctcgacctacgcctcgatcctcgatgtgctgaaagcccgc
ggctatgtgaagctcgagaagaagcggctgcatggcgaggacaagggtcgcgtcgtgatc
gcgttcctggagaacttcttccgccgctatgtcgagtacgatttcacggcggacttggaa
gagcagctcgaccgcatctccaacaacgagatcgcctggcagcaggtgctgaaggatttc
tggaccggcttcatcggcgccgtcgacgacatcaaggatctgcgcgtcgcgcaggtgctc
gatgcgctcgatgagatgctggggccgcacatctatccgccgcgcgccgatggtggcgac
gtccggcaatgcccgacctgcggcaccggacggctcaacctcaaggccggcaagttcggc
gccttcgtcggctgctcgaactatccggaatgccgctacacccgcccgctcgccgccgac
agcgaggccgcggccgatcgcattctcggccaggacccggattcgggcctcgacgtcgcc
gtcaaggccggccgcttcggcccctacatccagctcggcgagcagaaggactatgccgag
ggcgagaagcccaagcgcgccggcattcccaagggcacgcagccctcggacgtcgatctc
gatctcgcgctgaagctgctgtcgctgccgcgcgagatcggcaagcatccggagaccggc
ctgccgatcaccgcgggcctcggccgcttcgggccgttcgtgaagcacgacaagacctat
gcgagcctggaggccggcgacgaggtgttcgatatcggcctcaaccgtgcggtcaccctg
atcgccgaaaaggtcgcgaagggcccgagcaagcgcttcggcgccgatcccggcaaggcg
ctgggtgatcatccctcgctcggcccggtcgccgtgaaggccggccgctacggcgcctat
gtcaccgctggcggcgtcaacgccaccattcccggcgacaaggagaaggatacgatcacg
ctcgccgaggcgatcgcgctgctcgacgagcgcgcggccaagggcggcggcaaggccaag
ggcgccaaaaaggctgcgaagccggccaaggcggccgcgaagccgaaggccggcggcgac
gacgactcgccgaagccggcaaagaaggccgtcgcgaagaaggctgcgacgaagccgaaa
tcagagtccaccagcaaggcgcgcgcgccggttgccaaggcggccaagacatcggccaag
cctgcgaccaaggcgacgcccaagaagagcgccggcaaggcccgcggatga
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