Bradyrhizobium sp. BTAi1: BBta_5268
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Entry
BBta_5268 CDS
T00528
Name
(GenBank) Putative outer membrane autotransporter barrel
Organism
bbt
Bradyrhizobium sp. BTAi1
SSDB
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Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
ABQ37254
UniProt:
A0ABF7QAF6
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Position
5496268..5499504
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AA seq
1078 aa
AA seq
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MTCFARTNFAVPNSKPRRWLALSFLLAGTFLSTQALAIDVANQADWNTAVAAVAAAGANS
TVTINITSGFTLSSSLAQLQAANSNVTVNITGNGQTINGASSFQGIVVNGANAPTVNISS
LSITNTAAIGGNGQNGQNGYYSGGLAYGSGGGGGGGLGAGGGLLVGSGANVTIAAVTFTS
NSATGGHGGNGGSAQNAAADPVNGGNGGAGGAANNGGASGGGGAGGTGGHAGGQGTAGTA
GASLGDGGGGGGGSGTTNSTTYTNNNPGGSGNANGGNGGSGGDGATNASGAGGPGPGSDG
GAGGNGGAANGGAIYVATGGTLTILDSPISGNTVAGGAAGTPGIGIGPSAINGFSAAAGA
AQGAGIFLSGVTANIGVSGGSVTYGDSIGGTGLTTGGVNTAINKTGAGTLVLSATNTFTG
NVNISAGTVSIGATANLGNVANDVIISNGGTLAVTGTTTLANGRDFKIAGLSTIDVTSAT
TTTLQGIVSNGASAGTLVKAGGGILLLSGTNTYTGETNVIGGTLRAGTANAFGASTVFSV
LSGGTLDLNGFNKTFGTLSGDGAVTGANVTIAGTFTPGNGNPASSMAITGNLAFQSGAVY
LVQLNPTTASLAQITGTANLTGAAVTANYANGTYISKKYTILTATGGVSGTFSGVTNTNL
PAGFSSTLSYDSNNAFIDLTMNTASGSINQQNVSNALTNYFNRNGSIPVVFTGLTPTGLT
QISGETSTGSQQTTFTAMTQFMGIMTDPFLGGRGDQGSAPAGAIGYAEEALAYATKRNPN
DALAAIYTKAPAAPVARPNWSVWAAGFGGSQSTDGNTALGSNNTTSNIYGTAVGADYRFS
PFTIAGFSLAGGGTTFNVANGGSGRSDLFQAGAFVRHMIGAGYVSGALAYGWQNVTTNRT
VTVAGVDQLRANFDANTFAGRLEGGYRFISPWMGFGITPYAAAQFTTFNLPGYAESAVAG
ANTFALRFGSQSLTDTRSELGVRTDKAYALTDGVFTLRSRFAWAYDFNPSRSVGATFQTL
PGASFVVNGARLAQNSALTTVAAEMKWRNGWSAAASFEGEFSDVTRSYAGKGVVRYAW
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgacttgctttgcgagaacgaactttgctgtgccgaattcaaagccgcggcgctggctc
gcgctctctttcctccttgcaggcacgtttctgagcacccaggccctggcgatcgacgtc
gccaatcaggccgactggaatacggcagtggcggcggtcgcagccgcaggcgccaactcg
accgtgacaatcaacatcaccagcggcttcaccctgtccagctcgcttgcgcaactgcaa
gccgccaatagcaacgtcacggtgaacatcaccggcaatggccagacgatcaacggcgcc
tcctcgtttcagggcatcgtcgtcaacggtgccaatgcgccgaccgtgaatatctccagc
ctgtcgatcaccaacaccgctgcgatcggcggcaacggccagaatggccagaacggttac
tatagcggcggcttggcctatggctccggcggcggcggcggcggcggtctcggtgcaggc
ggcggcctgctggtcggcagcggcgccaacgtcacgattgccgcggtgacctttaccagc
aacagcgccaccggcggccatggaggcaacggcggcagcgctcagaacgcggcggctgac
ccggtcaatggcggcaatggtggcgcgggcggcgccgccaacaatggcggcgccagcggc
ggcggcggcgcgggcggcaccggcggacatgccggcggacaaggcacggccggcaccgcg
ggcgcctcgctcggtgacggcggcggcggcggcggcggctccggcaccaccaacagcacc
acctacaccaacaacaatcccggcggcagcggcaacgccaacggcggcaacggcggcagc
ggcggcgacggcgcgacgaatgccagcggcgcgggcggccccgggcccggctccgacggc
ggcgccggcggcaatggcggcgccgccaatggcggcgccatctacgtcgccaccggcggt
acgctgacgattctcgattcgccgatttccggcaacaccgtcgccggtggcgccgccggc
acccccggcatcgggatcgggccaagcgccatcaatggattttcagcagcggcaggcgca
gcgcagggcgccggcatcttcctgagcggcgtgacggccaatatcggcgtgtccggcggc
agcgtgacctatggcgactccatcggcggcaccggactgacgaccggcggcgtcaacacc
gccatcaacaagaccggcgccggcaccttggtgctgtcagcgaccaacaccttcaccggc
aacgtcaacatcagcgcaggcactgtttcgatcggcgccaccgcgaacctcggcaacgtt
gccaatgacgtgatcatttccaatggcggcacgctagcggtcactggcacgaccaccctc
gccaatggtcgcgacttcaagattgccggcctgtcgacgatcgatgtgacctcagcgacc
acgaccacgctgcaaggcattgtctccaacggcgcttccgccggcaccttggtaaaagcg
ggcggcggcatcctgctgctgtcgggcaccaacacctacaccggcgagaccaacgtcatc
ggcggtacgctgcgcgcgggtacggcgaacgcattcggcgccagcaccgtcttcagcgtg
ctgtccggcggcacgctggatctcaacggtttcaacaagaccttcggcacgctgagcggc
gacggcgccgtgaccggcgccaatgtgacgatcgccggcactttcacgcccggcaatggc
aacccggcctcgtccatggcaatcaccggaaacctcgcattccagtcgggtgcggtctat
ctggtgcagctcaacccgacgaccgcctcacttgcccagatcaccggcaccgccaatctt
accggcgctgcggtcactgcgaactacgccaacggcacctacatctccaagaagtacacc
attctcaccgcgaccggcggcgtcagcggcaccttcagcggcgtgaccaacaccaacctg
ccggcaggcttctcctccacgctgagctatgacagcaacaatgcgttcatcgacctcacg
atgaacacggcgtcgggcagcatcaaccagcagaacgtcagcaacgcgctcaccaactat
ttcaacaggaacggcagcattccggtcgtattcaccggcttgactccgacggggctgaca
cagatctcgggcgagacctcgaccggctcgcagcagacgacctttactgcgatgacccag
ttcatgggcatcatgaccgatccgttcctcggcggccgcggcgaccagggctctgcgccc
gccggcgcgatcggctatgccgaagaagcgctcgcttatgcgaccaagcgcaatccgaac
gacgccctggcggcgatctataccaaggcgccggccgcgccggtggcaaggccgaactgg
agcgtgtgggcggccggcttcggcggctcgcagagcaccgacggcaacaccgcgctcggc
tccaacaacacgaccagcaacatctacggcacggccgtcggcgccgactatcgcttctcg
cctttcacgatcgccggcttttcgctggcgggcggcggcaccacattcaacgtcgccaat
ggcggcagcgggcgctccgacctgttccaggccggcgccttcgtcaggcacatgatcggc
gcaggctatgtttcgggggcactggcctatggatggcagaacgtcaccaccaaccgcacg
gtgacggtggctggcgtcgatcagttgcgagccaattttgatgccaacaccttcgccggc
cggctcgaaggcggctatcgcttcatctcgccatggatggggttcggcatcacgccctac
gccgccgcgcagttcaccaccttcaacctgccgggctatgccgagagcgcggtcgccggc
gccaacactttcgcgctccgtttcggatcgcagagcttgaccgatacgaggtcggagctg
ggtgttcgcaccgacaaggcctatgcgctgacggacggcgtgttcacgctgcgcagccgc
ttcgcctgggcctatgacttcaatcccagccgttcggtcggagccacgttccagacactc
cccggcgcatccttcgtcgtcaacggcgcgcggctggcgcagaactcggcgctgacgacg
gtcgccgcggaaatgaagtggagaaacggctggtcagccgcagcaagcttcgaaggcgag
ttctcggacgtgacccgcagctacgccggcaagggcgtcgtgcgctacgcatggtga
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