Bradyrhizobium sp. BTAi1: BBta_6141
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Entry
BBta_6141 CDS
T00528
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bbt
Bradyrhizobium sp. BTAi1
Pathway
bbt03420
Nucleotide excision repair
bbt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBta_6141 (uvrD)
03430 Mismatch repair
BBta_6141 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbt03400
]
BBta_6141 (uvrD)
Enzymes [BR:
bbt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBta_6141 (uvrD)
DNA repair and recombination proteins [BR:
bbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBta_6141 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BBta_6141 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
PcrA_UvrD_tudor
UvrD_C_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABQ38066
RhizoBase:
BBta_6141
UniProt:
A5EPH2
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All DBs
Position
6368875..6371442
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AA seq
855 aa
AA seq
DB search
MTEPNRVSPFPAPDHQPVAGGIAARARAAASVGARYLAGLNPEQRDAVETLDGPVLVLAG
AGTGKTRVLTTRIAHILSQGRARPGEILSVTFTNKAAREMKTRLAEMLGQAVEGMPWLGT
FHSIAGRILRSHAELVQLKSNFTVLDVDDQIRLLKQLLQAENIDDKRWPARMLAGLIDGW
KNRGLMPSQVPPGEAAVFGNGKGGKLYASYQERLKILNAADFGDLLLENIRLFREHPDVL
RQYQSRFKFILVDEYQDTNVAQYLWLRLLSQAPSSGSSLPGSPRPSIASSEDGSPALDAA
RRPGDDDKSVAVAGPAPKNICCVGDDDQSIYGWRGAEVDNILRFEHDFPGAKVIRLERNY
RSTAHILAAASHLITHNEGRLGKTLRTEDVEGEKVTVTGAWDSEEEARGIGEEIEELQRK
GEPLNDIAILVRASYQMREFEDRFVTLGLPYRVIGGPRFYERAEIRDALAYLRVINSPAD
DLAFERIINVPKRGLGDATVQMLHDHARKRRIPLFEAARAVVETDELKPKARGSLRGLIL
QFERWRTQREVTPHTELAEIVLDESGYTEMWQKDRSADAAGRLDNLKELIRSMEEFENLH
GFLEHISLVMDREGAADEDAVSLMTLHSAKGLEFDNVFLPGWEEGLFPSQRTLDEQGRAG
LEEERRLAHVGLTRARRRAKIYFATNRRIHGTWTTTIPSRFLDELPADSVEITESKGGSG
WGGAGGYGPSRFDNVESFGSSYSTPGWQRAQARRPASRGASEGGFQEEPSPFAGRDPFGG
SFGGPFGRNKRGPLTIEGELVAKSTGTTSEFALGDRVFHQKFGYGKVVRVDGNKLTIAFD
KAGEKKVVDSFVERA
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcccaaccgcgtgagcccctttcctgcgcctgaccaccagcccgtcgccggc
ggtatcgccgcgcgtgcgcgtgccgccgcgtcggtgggcgcacgctatctcgcgggcctc
aatccggagcagcgcgacgcggtcgagacgctggatggccctgtcctggtgctggccggg
gcaggcaccggcaagacccgcgtgctcaccacccgcatcgcgcatattctgagccagggc
cgggcgcgccccggcgagatcctgtcggtgaccttcaccaacaaggcggcgcgtgagatg
aagacacgtctcgccgagatgctcggacaggcggtcgaaggcatgccttggctcggcacc
ttccactcgatcgccgggcgcatcctgcgcagccatgccgagctggtgcagctgaaatcc
aacttcaccgtgctcgacgtcgatgaccagatccgcctcctcaagcagctgctgcaggcc
gaaaacatcgacgacaaaaggtggccggcgcgcatgctggccggcctgatcgatggctgg
aaaaaccgcggcctgatgccgtcgcaggtgccgcccggcgaagccgccgtgttcggcaac
ggcaaaggcggcaagctctatgcgagctatcaggagcggctgaagatcctcaacgccgcc
gatttcggcgacctgctgctcgaaaacatccggctgttccgcgagcaccccgatgtgctc
aggcagtatcagagccgcttcaagttcatcctggtcgatgagtatcaggacaccaatgtt
gcgcagtacctctggctgcggctcctgtcgcaggcgccgtcctccggttcgtcattgccg
ggctcgccccgaccatccattgcttcttcagaggatggatcaccggctctcgacgctgcg
cgtcggcccggcgatgacgacaagagcgttgcggtcgctggccccgcccccaagaacatc
tgctgcgtcggcgacgacgaccagtcgatctatggctggcgcggcgccgaggtcgacaac
atcctgcgcttcgagcacgactttcccggcgccaaggtgatccggctggagcgcaattat
cgctcgacggcgcatattctcgccgcggcctcgcatctgatcacgcacaatgaaggacgc
ctcggcaagaccctgcgcaccgaggatgtcgagggcgagaaggtcacggtcaccggcgcc
tgggattcggaggaagaagcgcgcggcatcggcgaggagatcgaggagctgcagcgcaag
ggcgaaccgctcaacgacatcgcgatcctggtgcgcgcctcgtatcagatgcgcgagttc
gaggaccgcttcgtcacgctcggcctgccctatcgcgtcatcggcggcccgcgcttctat
gagcgcgccgagatccgcgacgcgttggcctatctgcgcgtcatcaattcgccggccgac
gatctcgccttcgagcgcatcatcaacgtgccgaagcgcgggctcggcgatgccaccgtg
cagatgctgcacgaccacgcccgcaagcgccgcatcccgctgttcgaagcggcgcgcgcg
gtggtcgagaccgacgagctgaagccgaaggcgcgcgggtcgctgcgcgggctgatcctg
cagttcgagcgctggcgcacccagcgcgaggtgacaccgcacaccgagctcgcagagatc
gtgctcgacgagagcggctataccgagatgtggcagaaggaccgctcggccgacgccgct
gggcggctcgacaatttgaaagagctcatccgttcgatggaggagttcgagaacctgcat
ggcttcctcgagcacatctcgctggtgatggaccgcgagggcgcggccgacgaggacgcg
gtctcgttgatgaccttgcactcggccaagggattggagttcgacaacgtgttcctgccg
ggctgggaggaaggcctgttcccgagccaacgcacgctcgacgaacagggccgcgccggg
ctcgaagaggagcgtcgcctcgcccatgtcggcctgacgcgcgcgcggcgacgcgccaag
atctattttgccaccaaccgccgcattcacggcacctggaccacgaccatcccgtcgcgc
ttcctggatgaactgccggccgacagcgtcgagatcacggaatccaagggcggttccggc
tggggcggcgccggcggctacggtccgtcgcggttcgacaatgtcgaatcgttcgggtcg
agctattccacgccgggctggcagcgcgcgcaggcgcggcgccctgcgtcacgaggcgct
tcggagggcggcttccaggaggagccatcgccgttcgcggggcgcgatccgttcggcggc
agcttcggcggtccattcggccgcaacaaacgcgggccgctgacgatcgagggcgagctg
gtcgcgaagtccaccggaacaacctccgaattcgcgctcggcgaccgcgtgtttcaccag
aagttcggctatggcaaagtggtcagggtcgatggcaacaagctgaccatcgccttcgac
aaggccggcgagaagaaggtcgtcgacagcttcgtcgagcgggcgtga
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