Bradyrhizobium sp. BTAi1: BBta_6924
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Entry
BBta_6924 CDS
T00528
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bbt
Bradyrhizobium sp. BTAi1
Pathway
bbt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBta_6924 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbt03019
]
BBta_6924 (recQ)
03400 DNA repair and recombination proteins [BR:
bbt03400
]
BBta_6924 (recQ)
Enzymes [BR:
bbt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBta_6924 (recQ)
Messenger RNA biogenesis [BR:
bbt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BBta_6924 (recQ)
DNA repair and recombination proteins [BR:
bbt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BBta_6924 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Fic-like_C
ResIII
Sigma70_r4_2
Hydant_A_N
HHH
Motif
Other DBs
NCBI-ProteinID:
ABQ38811
UniProt:
A0ABF7QE25
LinkDB
All DBs
Position
7252431..7254308
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AA seq
625 aa
AA seq
DB search
MASAPNATTDTADRALAVLHSVFGLPGFRGAQEKVVRHVTAGGNCLVLMPTGGGKSLCYQ
LPALLRKGCGIVVSPLIALMRDQVAGLTEAGVNAAVLNSTLSREEADEVERRLIAGDLDL
LYVAPERLVTPRCLALLERADIALFAIDEAHCVSQWGHDFRPEYIGLSIIAERFPEVPRI
ALTATADELTRKEIAERLGLTDAPQFVASFDRPNIRYEIVDKNNGPAQLKAFIKERHPGD
AGVVYCLSRAKVEDTAAALTEAGITAIPYHAGLEASVRSRNQDRFINEDGIVVVATVAFG
MGIDKPDVRFVAHLDLPKSIEAYYQETGRAGRDGKPSTAWMAYGLSDIVQQRRMIDESTG
AEAFKRVSIRKLDALVALAETAGCRRRLLLSYFGETPADEKCGNCDNCLSPPQVRDGKVI
AQKLLSCAYRTGQRFGAMHLIDVLVGRATERVKQFGHDQLSVFGVGRELNEKQWRAALRQ
LVAMGHLAPDSEAYGALKLTESARGVLKGETPILLREQTASTGRAIRSKSRRGDLVQRPA
AAGDATLLARLRAWRSEIARKRGVPAYVVLHDATIDGIASARPATLGQLRDIPGIGDKKL
EHYGDELLALITAAGASGSGSPSDS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagcccccaacgccacgaccgatacggccgatcgcgcgctggccgtgctgcat
tcggtgttcgggctgccgggctttcgcggcgcgcaggagaaggtggtccggcatgtcacc
gcgggcggcaattgcctggtgctgatgccgaccggcggcggcaagtcgctgtgctatcag
ctgccggcgctgctgcgcaaaggctgcggaatcgtcgtctcgccgctgattgccttgatg
cgcgaccaggtcgccgggctgaccgaggcgggcgtcaatgccgcggtgctgaactcgacg
ctgtcgcgcgaggaggccgacgaggtcgagcggcggctcatcgccggcgatctcgattta
ctttacgtcgcgccggagcggctggtgacgccgcgctgcctggcgctgctggagcgcgct
gacatcgcgttgttcgcgatcgacgaggcgcattgcgtgtcgcaatgggggcacgatttc
cgcccggaatatatcggcctgtcgatcattgccgaacgcttccccgaggtgccgcgcatc
gcgctgaccgcgaccgccgacgagctgacgcgcaaggagatcgccgaacggctcggcctc
accgacgcaccgcaattcgtcgcgagcttcgaccgcccgaacatccgctacgagatcgtc
gacaagaacaacgggccggcgcagctgaaggccttcatcaaggagcgccacccgggtgac
gccggcgtagtctactgcctgtcacgcgccaaggtcgaggataccgcggcggcgctgacc
gaggccggcatcaccgcgatcccctatcatgccgggctcgaggcgagcgtgcgttcgcgc
aaccaggaccgcttcatcaacgaggacggcatcgtcgtcgtcgcgaccgtcgccttcggc
atgggcatcgacaagcccgacgtgcgcttcgtggcgcatctcgatctgccgaaaagcatc
gaggcctactaccaggaaaccggacgcgccgggcgcgacggcaagccgtcgaccgcctgg
atggcctacggcctgtccgacatcgtgcagcagcgccggatgatcgacgagtccaccggc
gccgaggcgttcaagcgggtgtcgatccgcaagctcgacgcgctggtggcgctggccgag
accgccggctgccggcgccggctgctcctgagctatttcggcgagaccccggcggacgag
aaatgtggcaattgcgacaattgcctgtcgccgccgcaggtgcgcgacggcaaagtgatc
gcgcaaaagttgctgtcctgtgcctatcgcaccgggcagcgcttcggcgccatgcatttg
atcgacgtgctggtggggcgcgcgaccgagcgcgtcaagcagttcggacatgatcaattg
tcagtgttcggcgtcgggcgcgaacttaatgagaagcaatggcgcgcggcgctgcgccag
ctggtggcgatgggccatctcgcgccggacagcgaggcctatggcgcgctgaagctgacg
gagagcgcgcgcggcgtgttgaagggcgagacgccgatcctgctgcgcgagcagacggcg
agcaccggccgtgcgatccgcagcaaatcgcggcgtggcgacctggtgcagcggccggcc
gcggcaggcgatgccacgctgctcgcgcgcctgcgggcctggcgctcggagatcgcgcgc
aagcgtggtgtaccagcctatgtcgtgctgcacgacgcaaccatcgatggcatcgccagc
gcccggccggccacgctcgggcagcttcgcgacatccccgggatcggtgacaagaagctt
gaacattacggcgacgagttgctggcgctgatcacggcggcaggcgcctcaggatcagga
tcgccatcagacagttga
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