Bradyrhizobium sp. BTAi1: BBta_7074
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Entry
BBta_7074 CDS
T00528
Symbol
pimF
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
bbt
Bradyrhizobium sp. BTAi1
Pathway
bbt00071
Fatty acid degradation
bbt00362
Benzoate degradation
bbt00650
Butanoate metabolism
bbt01100
Metabolic pathways
bbt01120
Microbial metabolism in diverse environments
bbt01200
Carbon metabolism
bbt01212
Fatty acid metabolism
Module
bbt_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
bbt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BBta_7074 (pimF)
09103 Lipid metabolism
00071 Fatty acid degradation
BBta_7074 (pimF)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BBta_7074 (pimF)
Enzymes [BR:
bbt01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
BBta_7074 (pimF)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Pyr_redox_2
ApbA
NAD_binding_2
Pyr_redox
DAO
F420_oxidored
TrkA_N
NAD_Gly3P_dh_N
NAD_binding_7
FAD_binding_3
ThiF
Motif
Other DBs
NCBI-ProteinID:
ABQ38957
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Position
complement(7417759..7419852)
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AA seq
697 aa
AA seq
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MSEVAKLDRHDIVGIVTIDSPPVNALSAAVRGGILDNVKAAIADPEIKVIVLTCGGRTFI
AGADITEFGKPPKPPALNDVLSTIENSPKPVIAAIHGTALGGGLEVALACHYRVATKDAK
LGLPEVKLGLLPGAGGTQRLPRAVGPELAVKMIVGGDPIGAAEAHKAGLIEEIVEGPASG
AEAFARKVVAENRPLRKLRDDDSKLAAAKADRSIFTNAVAAITKKSRGLEAPFAAADAVG
YAIDLPFDEGLKREREGFLKLLTSDQSKAQRYAFFAEREAAKIAGVPEGTKGRKVDRVAI
IGAGTMGGGIAMSFANAGIPVTLIETAEEQLKRGMGVMQKNWEATAARGGIPADAPAKRM
ALIDGKVGLEHVKDADLVIEAVFETMAVKKEVFGKLDQYAKPGAVLASNTSYLNIDAIAA
ETSRPQDVLGMHFFSPANVMKLCEIVRAEKTAPDALVTAVSIARKIAKVPAVVGVCDGFV
GNRMLAQRGKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRKDRGIK
SEIADALCEAGRFGQKTGKGYYKYEAGSRAPLPDPDVEKLIDETLAKLGLKRRAVSDEEI
LERMMYPMINEGAKILAEGIAARPSDIDVVWLYGYGWPIYRGGPMYWADSVGLKHIAERL
AFYAKETNDPSLEPAPLLKKLADEGKTFASLAQGKAA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaagtggcaaagcttgatcgtcatgatatcgtcggcatcgtcaccatcgacagt
ccgcccgtcaatgcgctgagtgccgcagttcgcggtggtatcctggacaacgtcaaagcg
gccattgctgatcccgagatcaaggtcatcgttctgacctgtggcgggcgcaccttcatc
gccggcgccgacatcaccgagttcggcaagccgccgaagccgccggcgctcaacgacgtg
ctgagcacgatcgagaacagcccgaagccggtgatcgccgctattcatggaacggcgctg
ggcggtggtctcgaggtggcgctcgcctgtcattatcgtgtcgccaccaaggacgcgaag
ctcggcctgcccgaggtgaagctcggtctgctgccgggggcgggcggaacgcagcgcctg
ccgcgggccgtcggtccggaactcgccgtgaagatgatcgtcggtggtgatccgatcggt
gccgcggaggcgcacaaggcggggctgatcgaggagatcgtcgaggggcccgcgtcaggg
gccgaagcctttgcgcgcaaggtggtggcggagaaccgtccgctgcgcaagctgcgcgac
gatgattccaagctggcggcggccaaggcggaccgttcgatcttcaccaatgcggtcgcg
gcgatcaccaagaagtcgcgcggcctagaagcgccgttcgccgcggccgatgccgtcggc
tatgcgatcgacctgccgttcgacgagggcctgaagcgggagcgggagggcttcctcaag
ctcctcaccagcgaccagtccaaggcgcagcgctatgccttcttcgccgagcgcgaggct
gccaagattgccggcgtgcccgagggcaccaagggccgcaaggtcgatcgcgtcgcgatc
atcggcgctggcacgatgggcggcggtatcgcgatgtcgtttgccaatgccggcatcccg
gtgaccttgatcgagacggccgaggaacagctcaagcgcggcatgggcgtcatgcagaag
aactgggaggcgaccgccgcgcgcggcggcatcccggcggatgcgccggccaagcgcatg
gcgctgatcgacggcaaggtcgggctcgagcacgtcaaggatgccgacctcgtcattgag
gccgtgttcgagaccatggcggtgaagaaggaagtgttcggcaagctcgatcaatacgcc
aagcccggcgcggtgctcgcgtccaacacctcctacctgaacatcgacgccatcgccgca
gagaccagccgtccgcaggacgtgctcggcatgcacttcttctcgccggcgaacgtgatg
aagctgtgcgagatcgtccgcgccgagaagacggcgccggatgcgctggtgaccgccgtg
tcgatcgcgcgcaagatcgccaaggtgccggcggtggtcggcgtctgcgacggtttcgtc
ggcaaccgcatgctggcgcagcgtggcaagcaggccgagaagctgctgttcgaaggcgcg
ctgccgcagcaggtcgacgccgtcgtcaccaagttcggcatgccgatgggcccgttcgcg
atgggcgatctcgccggcctcgacatcggctggcgctcgcgcaaggaccgcggcatcaag
agcgaaatcgcggacgcgctgtgcgaagccggccgtttcggccagaagaccggcaagggc
tactacaaatatgaggccggctcgcgcgcgccgttgccggatcccgacgtcgaaaagctg
atcgacgagacgctcgccaagctcggcctcaagcgccgcgcagtcagcgacgaggagatc
ctcgagcgcatgatgtatccgatgatcaatgagggcgcgaaaatcctcgccgaggggatc
gccgcgcgtccgtcggacatcgatgtcgtctggctgtacggctatggctggccgatctat
cgcggcggcccgatgtactgggcggacagcgtcggcctgaagcatatcgccgagcgcctc
gccttctatgccaaggagacgaacgatccgtcgctggagccggcgccgctgctcaagaag
ctcgctgacgagggcaagacgttcgcgtcgctggcccaggggaaggccgcttga
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