Borreliella burgdorferi B31: BB_0230
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Entry
BB_0230 CDS
T00012
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bbu
Borreliella burgdorferi B31
Pathway
bbu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BB_0230 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbu03021
]
BB_0230 (rho)
03019 Messenger RNA biogenesis [BR:
bbu03019
]
BB_0230 (rho)
Transcription machinery [BR:
bbu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BB_0230 (rho)
Messenger RNA biogenesis [BR:
bbu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BB_0230 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
AAA
Spore_III_AA
DUF5091
AAA_22
AAA_25
DUF1269
OB_RNB
NB-ARC
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AAC66619
UniProt:
P33561
LinkDB
All DBs
Position
complement(235595..237142)
Genome browser
AA seq
515 aa
AA seq
DB search
MDKKNGGFDLESEIRRLDVSKEFKIEDNLKKKVVKVVAKKDSASSVTKSADLSGVKDSNG
VIFSDFDYDIPSSGLENNIKTLEQSNIIKFFNGKDYVEIEKLYDKPITEVRKIVEGLGTN
HTIAVTMKKTELIFLLVKILSENNIDVLFTGVLDVLSDGYGFLRTASNSYLSGGNDVYVS
PSQIRLFNLRTGDILYGQIRSPRDGERFFAMVKIKSINDQDPTFAQNRIPFDNLTPLYPN
VKLNLEYENCNISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYSDVILM
ILLIDERPEEVTDMIRSVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVENKKDVVILLD
SITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSARNIEEGGSLTIIATALVDTGS
KMDEVIFEEFKSTGNMELILDRSLADRRLFPAINIKKSGTRKEELLLSEEERSKILLIRR
ILGGVDDYEGVEVLIEKMKKSKNNEIFLKTMSNGN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaaaatggtggatttgatttagaaagtgaaataaggcggttggatgtttct
aaagagtttaagattgaagataatttgaaaaaaaaagtggttaaagttgttgctaaaaag
gattctgcatctagcgtgacaaaatctgcagatttaagtggcgtaaaggattcaaacggg
gtaatattttctgattttgattatgatattccttcttcaggtttagaaaataatattaaa
actttagagcaaagtaatatcatcaaattttttaatggtaaagattatgtagagattgaa
aaactttatgataagccaattacagaggttagaaaaattgttgaaggtcttgggaccaat
catactattgctgtaacaatgaaaaaaaccgaattaatatttttattggtgaaaatatta
agtgagaataatattgatgttttatttacaggtgtgcttgatgtgcttagtgatggttat
gggtttttgagaactgcatcaaattcttatctttctggaggcaatgatgtttacgtttct
ccctctcagattagactttttaatttaaggacaggtgatattttatatggccaaattaga
tcgcctagagatggtgagagattttttgcaatggttaaaattaaatctattaatgatcaa
gatcctacgtttgctcaaaacagaataccttttgataatttaactcctctttatcccaat
gtgaaattgaatcttgaatatgaaaattgcaatatttctacaaggcttattaatcttttt
tcacctataggtaaggggcaaagggctttaatagtttctcctccaaaagcgggaaagact
accctgcttcaaaaaatagctaatgcaataactactaattattcagatgttattttaatg
atactacttattgatgagaggccagaagaagttacagatatgattcgtagcgttaaaggc
gaagtaattgcatctaattttgatgagcaggctagtaggcatgttcaggtagcagagatg
gttattgaaaaggctaaaaggcttgttgaaaacaaaaaagatgttgttattttgcttgat
tctattacaaggcttgcaagggcatataatcaaactatgccaacttctggtaaaatttta
tcgggtggggtagattctaatgctcttcataagccaaagaggttttttgggtctgctaga
aatatagaagaagggggaagtttaactattatagctactgctttggttgatactggtagt
aaaatggatgaagttatttttgaagaatttaaaagtaccggtaatatggaattaattctt
gatagaagtttggcagacagaagactttttcctgctattaatattaaaaagtcaggtacc
agaaaagaagaattgcttcttagtgaagaggagcgttctaagattttgcttattagaaga
atacttggaggtgttgatgattatgagggagttgaagttctgatagaaaagatgaaaaaa
agcaaaaacaatgaaattttcttgaagacaatgagcaatggtaattga
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