Bubalus bubalis (water buffalo): 102389094
Help
Entry
102389094 CDS
T05912
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102389094 (CHD2)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102389094 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
102389094
NCBI-ProteinID:
XP_006078817
LinkDB
All DBs
Position
20:56239958..56351074
Genome browser
AA seq
1827 aa
AA seq
DB search
MMRNKDKSQEEDSSLHSNASSHSASEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESS
ESQSESESESAGSKSQPVLPEAKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPS
RFNIKEEASSGSESGSPKRRGQRQLKKQEKWKRELSEDEQEQGSSAESEPEQTVKARRPV
PRRTVPKPRVKKQPKTQRGKRKKQDSSDDEDEDDEAPKRQTRRRAAKNVSYKEDDDFETD
SDDLIEMTGEGVDEQQDNSETIEKVLDSRLGKKGATGASTTVYAVEANGDPSSDFDPEKD
EGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPEDVE
YFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAPSNEPEYLCKWMGLP
YSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYLGGEN
LELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVP
LSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLK
DKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLH
FIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEM
SALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCHLIKPPEENERENGQE
VLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSI
KGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARA
HRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLENNSGRSNSN
PFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDELLSQF
KVANFATMEDEEELDERPHKDWDEIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQ
TNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRRGRPRSVRKDLVEGFTDAEIRRFIK
AYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENASEGKG
PGKKRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYCLSCRVKAAHFDVEW
GVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQGKQLQTRADYLLKLL
RKSLEKEGTVTGGEEAKLKKRKPRVKKENKAPRLKDEHGIEFSSPRHSDNPSEEGEVKDD
GLEKSPTKKKQKKKENKENKEKQMSSRKDKEGDKERKRSKDKKEKPKGGDAKSSSKSKRS
QGPVHITAGSEPVPIGEDEEDDLDQETFSICKERMRPVKKALKQLDKPDKGLSVQEQLEH
TRSCLLKIGDRIAECLKAYSDQEHTKLWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRSQ
EEEEQKKKEDVIGGKKPFRPEASGSSRDSLMSQPHTPHNLHPQKPHLPASHGPQMHGHPR
DNYNHPNKRHFSNADRGDWQRERKFNYGGGNSNPPWGSDRHHQYEQHWYKDHHYGDRRHV
DAHRSGSYRPNNLSRKRPYDQYSSDRDHRGHRDYYDRHHHDSKRRRSDEFRPQNYHQQDF
RRMSDHRPPMGYHGQGPSDHHRSFHTDKLGEYKQPLPPLHPAVSDPRSPPSQKSPHDSKS
PLDHRSPLERSLEQKNNPDYNWNVRKT
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaagaggaggacagttcgctacacagcaatgcatcg
agtcattcagcatctgaagaagcttcgggttcagactcaggcagccagtcggagagtgag
cagggcagcgatccaggaagtggccatggcagtgagtcaaatagtagttctgaatcttcg
gagagtcagtcggaatctgagagtgaatcggcaggttccaagtcccagccagttcttcca
gaagccaaagagaaaccagcctctaagaaggaacggatagctgatgtgaagaagatgtgg
gaagaatatcctgatgtttatggggttaggcggtcaaaccgaagcagacaagaaccatca
cgatttaatattaaggaggaggcaagtagcgggtctgagagtgggagcccaaagagaaga
ggccagaggcagctgaaaaaacaagaaaaatggaaacgggagctctcggaagatgaacag
gaacaaggctccagtgcagagagcgaaccagagcagacagtgaaagccagaagacctgtc
cccagaagaacagtgcccaaacctcgtgttaaaaagcaacctaagactcagcgtggaaag
aggaaaaagcaagactcttctgatgatgaggatgaagatgatgaagctcccaaaaggcag
acgcgccgcagagcagctaaaaatgtgagttataaagaagacgatgactttgagactgac
tcagatgacctcattgaaatgactggagaaggagttgatgaacagcaggataatagtgaa
actattgaaaaggtcttagattcaaggctgggaaagaaaggagccactggagcttctacc
actgtgtatgcagtcgaagctaatggagaccctagcagcgactttgaccctgaaaaggat
gaaggcgaagtccagtacctcatcaagtggaagggctggtcatatatccacagcacatgg
gagagtgaagagtccttacagcaacaaaaagtgaagggtctaaaaaaactagagaacttc
aagaagaaagaggatgaaatcaagcagtggttagggaaggtttctcctgaagatgtggaa
tatttcaactgccaacaagagctggcctcggagctgaacaaacagtatcagatcgtagaa
agagtaatagctgtgaagacaagcaaatctacactgggtcaaacagactttccagctcac
agccggaagccggccccttccaacgaacctgagtatctatgcaagtggatgggactgccc
tattcagagtgcagctgggaagacgaagccctgatcggaaagaaattccagagctgcatc
gacagcttccacagtcgcaacaattcaaaaaccatccccacaagagaatgcaaggccctg
aagcagagaccacgatttgtggctttaaagaaacagccggcatatttaggaggagagaat
ctggagctccgagattatcagctggaaggtctcaactggcttgctcattcctggtgcaaa
agtaacagtgtaatccttgctgatgaaatgggcctaggaaagaccatccagaccatatca
ttcctctcctacctgttccaccaacaccagctgtatggcccctttcttatagtcgtccct
ttatccaccctcacctcatggcagagggagtttgaaatctgggcaccagagattaacgta
gtggtttacataggtgacctgatgagcagaaatacgatacgagaatatgaatggattcac
tctcagaccaaaaggctaaagttcaatgcgcttataacaacatatgagatcctcttaaaa
gataagactgtgctgggcagtattaactgggcctttctgggagtggatgaagcccatcgg
ttgaagaatgatgactctttattgtataaaactctgattgatttcaagtccaaccatagg
ctcctgattacggggacccctcttcagaattccctcaaagagctctggtccttgctgcac
tttattatgccggagaagtttgagttctgggaagattttgaagaagaccatgggaaaggg
agagagaatggctatcagagtcttcataaggtgctagagcctttccttctccggagagtg
aagaaagatgtggagaaatctcttcctgccaaagtggaacagattctcagagtagagatg
tcagcccttcagaaacagtattacaaatggattctgaccaggaattacaaggctctcgcc
aaaggaacgagaggcagcacatctggcttccttaatattgtgatggaactgaagaagtgc
tgcaaccactgccacctgattaaaccccctgaggaaaatgaaagggaaaatggacaggaa
gttcttctgtccctgatcaggagcagtgggaagctgattctgttagataaactgttgaca
agacttcgagaaagaggaaacagagtccttatcttctctcagatggtgaggatgttggat
atcctggctgagtacctgactattaagcactaccctttccagcgtctggatggttccatc
aagggagaaatccgaaaacaggcgctggaccacttcaacgcagatgggtctgaggacttc
tgtttcctgctctcgacaagggctggtggcctgggaatcaatttggcttcagcggacaca
gttgtcatctttgactctgactggaacccccagaacgacttgcaggcacaagcccgagcc
cacagaattggtcagaagaagcaggtaaatatttaccgcttggttacaaaggggaccgtg
gaggaagagatcatagaacgggccaaaaagaagatggtattggaccacctggtgattcag
cgcatggataccactggccgaacggttctggaaaacaactctgggaggtccaattcaaat
ccttttaataaagaagagctgacagcgattttgaaatttggagcagaggatctcttcaaa
gagcttgaaggggaagaatcagagcctcaggaaatggatatagatgaaattttgcgcttg
gctgaaaccagagagaatgaagtctcaacaagtgcaacagatgaacttctgtcacaattt
aaggttgccaactttgcaacaatggaggatgaagaagagcttgacgagcgtcctcacaag
gactgggatgagatcatcccagaggagcaaaggaagaaagtggaggaagaagagcgacag
aaggagctggaagagatttacatgttgcctcgaattcggagttccactaaaaaggctcag
acaaatgacagtgactctgatactgagtccaagagacaggcccagaggtcctctgcctct
gagagtgagacggatgactctgatgacgacaagaagcccaagcgcagagggcgtccccga
agtgtgcggaaggacctggtggaggggttcacagacgccgagatccggaggttcatcaag
gcgtataagaagtttggtctccctcttgaacggctggagtgcatagcacgtgatgctgag
ctggtagataagtctgtggcggatctgaagcgcttgggggaactgattcacaacagctgt
gtgtcagcaatgcaggaatatgaagagcagctgaaagaaaatgccagcgaggggaaagga
ccagggaaaaagagaggcccaactatcaagatatctggggttcaggttaatgtgaaatct
attatccaacatgaagaagagtttgagatgctgcataaatctatccctgtagaccctgaa
gaaaaaaaaaaatattgcttatcctgtcgtgtcaaagctgcacattttgatgttgagtgg
ggagtagaggacgactctcgtctattgctgggaatttatgaacatggctatggaaactgg
gagctaattaaaacggacccagagcttaagttaactgacaaaattctgcccgtggagaca
gataagaagccccaggggaagcagctgcagacccgagcagactacttgctgaagctgctc
aggaagagtctggagaaggagggcaccgtgacgggcggggaagaggccaaattaaagaag
cggaagcctcgagtgaaaaaggaaaacaaagcaccgaggctgaaggacgagcatggaatt
gagttttcatctcctcgacactcagacaatccatcagaagagggagaagtaaaggacgat
ggcttagaaaaaagtccaacgaaaaagaaacagaagaagaaagagaacaaggagaacaag
gagaagcaaatgagttctaggaaagacaaggaaggggacaaggaaaggaagagatctaaa
gacaagaaagagaagcctaaaggtggtgatgccaaatcttcaagtaaatccaagcgctct
cagggccctgtccatatcacagcaggaagcgaacccgtccccattggagaggatgaggag
gatgatctggaccaagagacattcagcatatgtaaggagcggatgcggcctgtgaagaag
gcgctgaagcagctggacaagcctgacaaggggctcagcgtccaggagcagctggagcac
acgcggagctgcctgctgaagatcggggaccggatagccgagtgcctgaaagcttactca
gaccaggagcacaccaagctgtggaggaggaacctatggatttttgtctccaagtttaca
gaatttgatgctcgaaaattgcacaagttatacaagatggctcataagaaaagatctcaa
gaagaagaggagcagaagaagaaagaggatgtgattggtggtaagaaaccatttcgacca
gaggcctcgggttccagccgtgactccctgatgtctcagccccacaccccgcacaacctt
cacccgcagaagcctcacttgcctgcctctcatggcccacagatgcatggacacccaaga
gacaactacaatcaccccaacaagagacacttcagtaatgcagatcgaggcgactggcag
agggaaagaaagttcaactatggtggtggcaacagcaatccgccctgggggagtgacagg
caccatcagtatgagcagcactggtacaaggaccaccattatggggaccggcggcacgtg
gacgcccaccgctcagggagctaccgccccaacaacctatcgagaaagagaccgtacgac
cagtacagcagcgaccgagaccaccgggggcacagggactactatgaccggcaccatcat
gactccaagcggaggcgatccgatgaatttaggcctcaaaattaccaccagcaggatttc
cgacgaatgtctgatcaccgcccccctatgggctaccacggccaggggccctcggaccat
caccgctctttccacacagacaaactgggggagtataaacagcccctacccccgctgcac
cccgcagtctcagatcctcgctcgcccccttctcagaaatctcctcacgattccaagtca
cccctggatcatcggtctcctttggagagatcactagaacagaaaaacaacccagattat
aactggaatgttaggaaaacataa
DBGET
integrated database retrieval system
