Bubalus bubalis (water buffalo): 102389342
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Entry
102389342 CDS
T05912
Symbol
ZC3H12D
Name
(RefSeq) probable ribonuclease ZC3H12D isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102389342 (ZC3H12D)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
102389342 (ZC3H12D)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Crp
Motif
Other DBs
NCBI-GeneID:
102389342
NCBI-ProteinID:
XP_025150199
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All DBs
Position
10:17326142..17360943
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AA seq
567 aa
AA seq
DB search
MGSFKSLCKKMSGNNEEKPHAGGALPGGSRRQNPCGGPGWRSMQRSSKMEFFQKLGYSRE
DVARVLGKLGEDALVNDVLQELIQTGSRPAAPEGSAAPLLVPRGSCGTPDSAQGGLGADP
GEDSGGPASSLRPIVIDGSNVAMSHGNKEIFSCRGIQLAVDWFRDRGHTYIKVFVPSWRK
EPPRSDAPITEQHVLEELERQAVLVYTPSRKVSGKRVVCYDDRYIVKVAYDLDGVIVSND
NYRDLQSENPEWKWFIEQRLLMFSFVNDRFMPPDDPLGRRGPTLSNFLSRKPKPPEPSWQ
HCPYGKKCTYGIKCKFYHPERPHQAQLAVADELRAQTRAWRGAGGEEERRGSARAASLGE
QGGSRDAPAARPGPRELGTGSLPTARRSAGVATLESSFSRLFLSDDPGLLRAPPRGPGCG
LAPGPPGPDWVAPGSLSSLPAPPGLLSPPGLRGEYGPRAPQSDRRSPRQQPGDPWVLPPG
AGQLPGRSAWAESDWDDGAFGGPLRPAPQAVAGEVDARSRARTALCSIFPPHEVDSIMAL
FPELSDVARLMLLIQRFQRSSAPVGKR
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtttcaagagcctctgcaagaaaatgagtggaaacaatgaagaaaaacctcat
gccggcggggcgctgccaggaggaagccggcggcagaacccttgcgggggtcccggctgg
cgcagcatgcagcgctcgagcaagatggagttcttccagaagctgggctacagccgggag
gacgtggccagggtgctgggcaagctgggcgaggacgccctggtcaatgacgtgctgcag
gagctgatccagacgggcagccggcccgccgcgcctgagggcagcgccgcacccctgctc
gtgcccaggggctcctgcgggaccccggactctgcccagggcgggctaggagcggaccct
ggagaagacagtggaggccccgccagctccttgagacccatagtgatcgacggcagcaac
gtagctatgagccatgggaataaagaaatcttctcttgccggggaatccagctggccgtg
gactggttcagggacagaggacacacctacatcaaagtttttgtcccctcctggaggaaa
gagccaccgaggtctgacgccccgattacagagcagcacgtgctggaggagctggagagg
caggcggtgctggtgtacacgccgtcccgcaaagtgagcggcaagcgcgtggtgtgctat
gacgaccgctacatcgtgaaggtggcctacgacctggacggcgtcatcgtctccaacgac
aactaccgcgacctgcagagcgagaaccctgagtggaagtggttcatcgagcagaggctg
ctcatgttctccttcgtcaacgatcggttcatgcctcctgatgaccccctgggccgtcgg
ggacccaccttgagcaacttcctgagcaggaagccaaagcccccagagccgtcctggcag
cactgcccctacggcaagaaatgcacctacggcatcaagtgcaagttctaccacccggag
aggccgcaccaggcgcagctggcggtggccgacgagctccgcgcgcagacacgggcctgg
cggggcgcgggcggcgaggaagagcggcgggggagcgcgcgcgcggccagcctgggggag
cagggcggctcccgggacgcccccgccgcccggcccggcccccgggagctcggcacgggc
agcctgcccactgcgcggcggtcggcgggcgtggcgactctcgaaagcagcttctcgcgg
ctcttcctgagtgacgacccggggctcctccgggcgccccctcggggccctggctgcggc
ctcgcacccgggccgcccggtcccgattgggtggcgcccgggtccttgtcgtccctgcca
gccccacccggcctcctgagcccgcctggcctgcggggtgagtatggcccccgcgccccg
cagagcgaccgacgctccccgcgccagcagcccggcgacccgtgggtccttcctccaggc
gctggccagctcccgggtcgctcggcctgggccgagtcggactgggacgacggtgccttc
ggggggcccttgaggccggcgccccaggctgtagctggcgaggtggacgcgcgctcccgg
gcgcgcaccgcgctctgcagtatctttccgccccacgaggtggacagcatcatggccctg
ttccccgagctctccgacgtggccaggctcatgctcctcatccagagattccaaaggtcc
agtgcgcccgtggggaagcgctga
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