Bubalus bubalis (water buffalo): 102389427
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Entry
102389427 CDS
T05912
Symbol
GSDME
Name
(RefSeq) gasdermin-E isoform X1
KO
K22146
gasdermin-E
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102389427 (GSDME)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bbub02000
]
102389427 (GSDME)
Transporters [BR:
bbub02000
]
Other transporters
Pores ion channels [TC:
1
]
102389427 (GSDME)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
ATG5_HBR
Motif
Other DBs
NCBI-GeneID:
102389427
NCBI-ProteinID:
XP_044802670
LinkDB
All DBs
Position
8:70631548..70748790
Genome browser
AA seq
496 aa
AA seq
DB search
MFAKATRNFLKEVDAGGNLIAVSNLNDSDKLQLLSLVTKKKRYWCWQRPKYQFLSVTLGD
VLTEDQFLSPVVVESDFVKYEGKFENHVSGTLETALGKVKLNVGGKGLVESQSSFGTLRK
QEVDLQQLIGDAQERTINLKNPVLQQVLERKNAVLCVLTQKIVTTQKCVISEHVQIEEKC
GGMVGIQTKTVQVSAMEDGNIIKDSNVVLEIPAPTTIAYGVIELYVRADGQFEFCLLQGK
HGGFEQERRSNSVLLDPLPFREFVFWDMPDAGQGLPAQDKPLSVLKQATLLLERNFHPFM
ELPKQQQTALNDVLQVVLLDEELLVVLEQVCDDIVSSLSPSLVALGELKPSQKHNLTTFL
RLAGCSVQGERLGSEDVVNNQKLFSTAYFLVSALAEMPDNAAALLGTCCKLQIIPLLYHL
LRALSHDGVSDLEDPALAPLKDREKFGIVQRLFAATDINLERMQSSVKAASREDPNVLPL
ILYISLSGLCALGRAQ
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaaagcaacacgaaattttcttaaggaagttgatgctggaggtaacctgatc
gcagtatcaaacttgaatgactcagataaattacaacttctaagtctggtgaccaaaaaa
aagagatactggtgctggcagagacccaagtaccagtttttatctgtcactcttggagat
gtactcacagaagaccagtttctgagtccagtggtcgtggagtcggactttgtgaagtac
gagggcaagtttgaaaaccatgtgagtgggaccctggagacagccctggggaaggtcaag
ctgaatgttggcggcaaaggcctcgtggagagtcagtcctcctttggaaccctgaggaag
caggaggtggacttgcagcagctcatcggagatgcccaggagagaacaatcaacctgaag
aacccggtactgcagcaggtgctggagagaaagaacgcggtcctgtgtgtcctgacgcag
aagatcgtgacgacacagaagtgcgtgatatccgagcacgtccagatcgaggagaagtgt
ggtggcatggtggggatccagaccaagactgtgcaggtgtcagcaatggaggatgggaac
atcatcaaggacagcaacgtggtgctggagatcccagctcccaccaccattgcctacggt
gtcatcgagctgtacgtgagggcagacggccagttcgaattctgcctcctacaagggaag
catggtggctttgaacaggaaaggagaagcaactctgtattgctggaccccctgcccttc
cgagagtttgtgttctgggacatgccggatgccggacaagggctgcctgcccaggataag
ccactgagtgttttaaaacaagccactctgctcttagagaggaatttccatcccttcatg
gagttgcccaagcagcaacagacagccctgaatgacgtcctccaagtggtcctgttggat
gaagaattactggtggtcctggaacaagtgtgtgatgacatcgtcagcagcctgtcaccc
tcactggtggctctgggggagctgaagccatcacagaagcacaacctcacgaccttcctg
cggctggcggggtgcagtgtgcagggcgagcgtctgggctcagaggatgtggtcaacaac
cagaaactcttctctacagcctacttcttggtcagtgcgctagcagaaatgccagacaat
gcagcagctttgctgggcacttgctgtaaactccagattatccctctgctgtaccacctg
ctccgtgctctgtctcatgatggtgtgtctgatcttgaagacccagctttggctcctctg
aaagacagagaaaagtttgggatcgtgcagcgtctgtttgccgcaactgacattaacctg
gagagaatgcaatcatccgtgaaagctgccagcagggaggatcctaacgtcttaccactg
atactttacatcagcctgagtggactctgtgctttgggcagagcacagtaa
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