Bubalus bubalis (water buffalo): 102389522
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Entry
102389522 CDS
T05912
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bbub02000
]
102389522 (TMC5)
03037 Cilium and associated proteins [BR:
bbub03037
]
102389522 (TMC5)
Transporters [BR:
bbub02000
]
Other transporters
Pores ion channels [TC:
1
]
102389522 (TMC5)
Cilium and associated proteins [BR:
bbub03037
]
Other cilia and associated proteins
Stereociliary proteins
102389522 (TMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
102389522
NCBI-ProteinID:
XP_006073994
LinkDB
All DBs
Position
24:complement(25163835..25244690)
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AA seq
993 aa
AA seq
DB search
MSAYRNSAYEEDPDYPDYSGSRNHTQRYLKTPGPLNNSDEPSTRSNPYPAESRTSPDYLG
SLAEPDYPGSQSNPDYPGTRSHPYSAETDYPKPMAEPEYIGSQGNPYQPGSSRKPDYSQS
QRNPDFPGSEGSGNYTGSRINPDYLDSLGEPDYPGAQENLNSFGPRASSNHPGSRRNPEH
ASPRVKAYIDSLGEPDYPGAESQSNHPHVFGEPDYLDAEDYQNSPNFWGEPDYPGAENGH
DYGSSGDPEMARQMLSRTSSVQPSFHHEGVSPLGILGREDVDYPESIEMKSVGMANPYPD
APGNGYVNPAYVGDEGPGPAYGDPPLSGHDWLSSPQGQKLIESLIPMTSRDRIKAIRNQP
RTMEEKRNLRKMVDKEKSKQSRHILELNCCAQCLNSISLAYRRFKNNLSELLDSISLWQK
TLKVIGGKFGTSVLSYFNFLRWLLKFNIFSFIVTFSFIIIPQLTVMEKNHLQFTGLEFLT
GAGYFTNTVMYYGFYTNSTIRHGNSGASYNMQLAYIFTIGGCLVVCFFSLLFSMARYFRN
NFINPHIYSRGIAKLIFCWDFTVTHESAVKLKQKNLSTEIRENLSEILQENVKLTFNQQF
IRFSAHVAAWVVSSGVAIICCVAVYYLAENNLQFLANHSNPGAVLLLPFVVSCINLVVPR
FYSMFRLVERYEMPRHEVYTLLIRNIFLKISIIGILCYYWLNIVALDSEECWETLIGQEI
YRLLLMDFVFSLADSFLGEFLRRIIGMRLITSLGLQEFDIARNVLELIYAQTLVWIGTFF
CPLLPFIQMITLFIMFYVKNISLMMNFQPPSKAWRASQMMTFFIFLLFFPSFTGVLCTLA
ITIWRLKPSADCGPFRGLAFFIESIYSWINTLRKRSSYLWVVWIYQNLIGSVHFFFILTL
IVLIITYLYWQITEGRKIMIRLLHEQIINEGKDKMFLIDKLIKLQGMEKRANPTLFTLER
RDLEQWGPLHVRQHDAPRDLRFRQSFQEDNPKA
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctacaggaatagcgcttatgaggaagacccagattaccctgactattctggg
tctcgaaaccatactcagaggtatttgaaaactccaggtcctctgaacaactcagatgaa
cccagcaccaggagcaacccatacccagcagagtccagaacaagtccagactatcttggg
tctctagcagaaccagattatcctggatctcagagtaatccagactaccctggcaccagg
agccatccatactctgcagagacagactatcccaaacccatggcagagccagagtatatt
ggatctcaggggaatccataccaaccaggctcatctagaaagccagactattctcagtct
caacgaaatcctgattttcctggttccgaaggcagcggaaactatacaggctccagaata
aatccagattatctcgactccttgggagaaccagactaccctggagctcaggaaaacttg
aactcttttggccccagggccagttcaaaccatccaggctccagaaggaatccggagcat
gctagccccagagtcaaggcatacatagactctctgggagagcctgattatccaggtgct
gagagtcaatctaaccatccacacgtttttggagaaccagactatctggatgctgaagac
tatcagaactctccaaacttttggggagagcctgattacccaggtgctgagaatggtcat
gattatggctcttcaggggacccggaaatggccaggcaaatgctcagcagaacatcttca
gtccagccctcatttcaccatgagggtgtcagccccttgggcatccttgggagagaagat
gttgattatcctgaaagcattgaaatgaaatctgtggggatggcaaatccatatccagat
gctcctggcaatggctatgtgaatcctgcttatgtgggtgatgaaggtcctggcccagct
tatggagacccacccttgtctggacatgattggctcagttcaccccaaggacaaaagtta
atcgagtctctgatacccatgacatctagagacagaattaaagccattaggaatcagcca
aggaccatggaagaaaaaaggaaccttaggaaaatggttgacaaagagaaaagtaagcag
tcccgtcatatcctggagctcaactgctgtgctcagtgtctgaactccatttcactggca
taccgaaggttcaagaacaacctgtcggaactgctcgattccatcagcctgtggcagaag
acgctcaaggtcatcggaggcaagttcggcaccagcgtcctctcctatttcaacttcctg
aggtggcttttgaagttcaacatcttctcgttcattgtgaccttcagtttcatcataatc
cctcagctaactgtgatggagaagaaccacctccaattcacgggactggaatttctaact
ggggcgggttattttactaacacagtgatgtactacggcttttacaccaattctacgatc
cggcatggcaacagcggggcctcctacaacatgcagctggcctacatctttacaatcgga
ggctgtttggtcgtctgcttttttagtttgctcttcagtatggccaggtatttccggaac
aacttcattaacccccacatttactccagagggattgccaagctcattttttgctgggac
ttcactgtcactcatgaaagtgcagtaaagctgaaacagaagaatctgagcactgaaata
agggagaacctgtcagaaatccttcaggagaacgtcaagttaacattcaatcagcagttt
atccgcttctctgcccacgtggcagcctgggttgtctcttccggagtggccatcatctgc
tgtgtagccgtttattacctggctgagaacaatttacagttcctggcgaaccacagtaac
cctggggcggtgcttttactgcctttcgtcgtgtcctgcatcaacctggtcgtgcctcgc
ttctactccatgttcaggctggtggagcgctacgagatgccgaggcacgaagtctatacc
ctcctgatccgaaatatctttctgaaaatatcaatcattggaattctgtgttactattgg
ctcaacattgtggccctggatagtgaagagtgttgggaaaccctcataggccaagaaatc
taccggctcctgctgatggattttgtgttctctttagctgattccttcctgggggagttc
ctgagaagaatcattgggatgcggcttatcacaagtcttggcttacaggagtttgacatt
gccagaaatgtgttagaactcatctatgcacaaactctggtgtggattggaaccttcttc
tgtcctttgctgccctttatccaaatgattactcttttcatcatgttctacgtcaaaaat
atcagcctgatgatgaatttccagcctccgagcaaagcgtggcgggcctcgcagatgatg
actttcttcatctttctgcttttcttcccatccttcactggggtcctgtgcaccctggcc
atcaccatctggagattgaaaccttcagctgactgtggtccgtttcgaggtctggccttc
ttcattgagtcgatctacagctggatcaacaccctgaggaaaaggtccagctacctgtgg
gttgtttggatctaccagaacctcatcgggagcgtgcacttcttcttcatcctcaccctc
attgtcttaatcatcacttacctttactggcagatcacagagggaaggaagattatgata
agactgctccatgaacagatcattaatgagggcaaagacaaaatgttcctgatagataag
ttgatcaagctgcaaggtatggagaagagagcaaaccccaccttatttacactggaaaga
agagatttggagcaatggggccctctgcatgtcaggcaacatgatgctcctcgagacctg
agattcaggcaatcatttcaagaagataatccaaaggcctga
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