Bubalus bubalis (water buffalo): 102389861
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Entry
102389861 CDS
T05912
Symbol
COL10A1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102389861 (COL10A1)
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Gene cluster
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Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
102389861
NCBI-ProteinID:
XP_025150531
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Position
10:complement(69687027..69693371)
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AA seq
688 aa
AA seq
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MKLFFSVFQNPAEIMLPQTALLLLMSLNLVHGVFYTERYQTPTGIKGPPSNTKTQFFIPY
AIKGKGVSLRGEQGIPGPPGPAGPRGHPGPSGPPGKPGTGSPGPQGQPGLPGPPGLSATG
KPGVPGLPGKQGERGLNGPKGDIGPAGLPGPRGPPGPPGIPGPAGISVPGKPGPQGPTGE
PGPRGFPGEKGTPGVPGLNGQKGEMGYCTPCRPGERGLPGPQGPTGPPGPPGVGKRGENG
LPGQPGLKGDQGVPGERGPAGPPGPQGPPGEQGPEGIGKPGAPGTPGQPGIPGMKGHPGA
PGTAGLPGAPGFGKPGLPGLKGQRGPVGLPGSPGAKGEQGPAGHPGEAGLPGPSGNMGPQ
GPKGIPGNPGLPGPKGEMGPVGPAGNPGAKGERGSSGLDGKPGYPGEPGLNGPKGNPGLP
GPKGDPGIAGSPGLPGPVGPAGAKGVPGHNGEAGPRGVPGIPGTRGPIGPPGIPGFPGSK
GDAGTPGPPGPAGIAVKGLNGPTGPPGPPGPRGNAGEPGLPGPPGPPGPPGQAALPEDFV
KAGQRLFVSANQGVTGMPVSAFTVILSKAYPAIGTPIPFDKILYNKQQHYDPRTGIFTCK
IPGIYYFSYHIHVKGTHAWVGLYKNGTPVMYTYDEYIKGYLDQASGSAVIDLTENDQVWL
QLPNAGSNGLYSSEYVHSSFSGFLVAPM
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaaattattcttttctgtttttcagaatccagctgagatcatgctgccacaaacagca
cttttgctgctaatgtccttgaacttggttcatggagtgttttacactgagcgataccaa
acacctacaggcataaaaggcccaccatccaacaccaagacacagttcttcatcccgtat
gccataaagggtaaaggtgtgtcactaagaggagagcaaggcatccccggtccaccaggc
cccgctggacctcgagggcacccaggcccgtcaggaccaccaggaaagcctggcactgga
agccctgggccccagggacagccagggttgccaggaccaccgggactgtcagccactggg
aagccaggtgtgccaggactcccaggaaaacaaggggagagaggactaaatggaccaaaa
ggagatattggaccagctggtttaccaggaccacggggcccaccagggccacccggaatc
cccggcccagctggaatttctgttccaggaaaacctgggccacaaggacctacaggagaa
ccaggtcccaggggctttcctggagaaaagggtacgccaggggtccctggactgaatgga
cagaaaggggaaatggggtattgtactccttgccgcccaggtgagaggggcctcccaggt
cctcagggtcccacgggaccacctggtcctcctggagtggggaaaagaggtgaaaatggg
ttaccaggacagccaggcctcaaaggtgatcagggtgttccaggggaaaggggaccagct
ggcccaccaggcccccaaggccctcctggggaacaaggaccagaaggcattggaaagcca
ggagcccctggaactccaggccagccagggatcccagggatgaaaggtcacccaggggct
ccaggaacagctgggctcccgggggctcccggctttgggaaaccaggcttgccaggcctg
aagggacaaaggggacccgtgggtcttccagggagtccaggtgccaaaggggaacaaggc
ccagcaggtcatcctggggaagcaggtctgcccggaccctcagggaatatgggaccccaa
ggaccaaaaggcattccaggcaaccccgggctcccaggccctaaaggtgagatggggcca
gtggggcctgcaggaaaccctggggcgaagggagaaaggggctcctctggcttagatgga
aaaccagggtacccaggagaaccaggtctcaatggtcccaagggtaacccagggttgcca
ggcccaaaaggtgaccctggaattgcaggatcccctggtctcccaggccccgtgggtcca
gcaggagctaagggagtgcctggacacaatggcgaggctgggcccagaggtgtccctgga
ataccaggtactagaggtcccattgggccaccaggcattccaggattccctggatccaaa
ggcgatgcgggaactccagggcctcctggcccagctggcatagcagtcaagggcctcaat
ggacctactgggccaccagggcctccagggccaagaggcaatgctggggagcctggcctc
ccagggcccccagggcccccaggccctccaggccaagcagccctgcccgaggactttgta
aaggcaggccaaaggctgttcgttagtgccaatcagggagtaacaggaatgcctgtgtct
gctttcactgttatcctctccaaagcttacccagctataggtactcctatcccattcgat
aagattttatataacaagcaacagcattacgacccaagaactggaatcttcacctgtaag
attccagggatatattacttctcttaccacatacatgtgaaagggacccatgcttgggta
ggtctgtataagaacggcacccctgtaatgtacacctatgatgagtacatcaagggctac
ctggatcaggcttcagggagcgccgtgatcgacctcaccgagaacgaccaggtatggctc
cagctgcccaatgcaggctcgaacgggctgtactcctctgagtacgtccactcctctttc
tcaggattcttggtggctccaatgtga
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