Bubalus bubalis (water buffalo): 102389917
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Entry
102389917 CDS
T05912
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102389917 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bbub04990
]
102389917 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
bbub04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
102389917 (PDLIM1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
DUF6288
DUF3322
Motif
Other DBs
NCBI-GeneID:
102389917
NCBI-ProteinID:
XP_006067894
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All DBs
Position
23:complement(16951997..16992307)
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AA seq
329 aa
AA seq
DB search
MTTLQIVLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAAIGNLCVGDVITAIDGENTSN
MTHLEAQNKIKGCTDNMTLTVARSEQKIWSPLVTEEGKRHPYKMNLASEPQEALHIGSAH
NRSAVPFTASPASSSAPRVITNQYNNPAGLYSSENISSFNNALESKTAASGQETNGRALD
HSQLPSGLVIDKESEVYKMLQEKQELNEPPKQSTSFLVLQEILESEEKGDPNKPSGFRSV
KAPVTKVAASIGNAQKLPMCDKCGTGIVGVFVKLRERHRHPECYVCTDCGTNLKQKGHFF
VEDQIYCEKHARERVTPPEGYDVITVFPK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccctgcaaatagtcctgcagggcccgggaccctggggcttccgcctcgtgggg
ggcaaggacttcgagcagcctctcgccatttcccgggttactcccggaagcaaggctgct
ataggtaatttatgtgttggagatgtaatcacagccatcgatggggaaaataccagcaat
atgacacacttggaagctcagaacaaaatcaaaggctgcacagacaacatgactctcaca
gtagccagatctgaacagaaaatctggtctcctctggtgacagaggaagggaaacgtcac
ccatacaagatgaatttagcctctgaaccccaagaggccctccacataggaagcgcccac
aaccggagtgccgtgccctttactgcctcacccgcctccagctctgcccccagggtcatc
acaaaccagtacaacaacccagctggcctctactcctctgaaaatatctccagcttcaac
aacgccttggagtcaaagacagcagccagtgggcaggagacgaatggcagagccttagac
cattctcagctcccaagcggactcgtcatcgataaagaatctgaagtttacaagatgctt
caggagaaacaggagttaaatgagcctccgaaacagtccacttcgttcctggttttgcag
gaaatcctggagtctgaggagaaaggggatcccaacaagccctcaggattcagaagtgtt
aaggctccagtcaccaaagtggctgcttcaattggaaatgcccagaagctgcccatgtgt
gacaaatgtggcactggcattgtcggcgtgttcgtgaagctgcgggaacgtcaccgccac
cccgagtgttacgtgtgcaccgactgtggcaccaacctgaaacagaagggccatttcttc
gtggaggatcagatctactgtgaaaagcatgcccgggaacgggtcactccacctgagggc
tatgacgtgatcacggtgttccccaagtga
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