Bubalus bubalis (water buffalo): 102389939
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Entry
102389939 CDS
T05912
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102389939 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbub03009
]
102389939 (REXO1)
Ribosome biogenesis [BR:
bbub03009
]
Eukaryotic type
Pre-60S particles
RNases
102389939 (REXO1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
REX3_middle
TIL_2
Motif
Other DBs
NCBI-GeneID:
102389939
NCBI-ProteinID:
XP_006050608
LinkDB
All DBs
Position
9:66894724..66914256
Genome browser
AA seq
1205 aa
AA seq
DB search
MLRSTGFFRAIDCPYWAGAPGGPCRRPYCHFRHRGARGPGAPGEGGAVSPAAGLGYDPYN
PELPKPPAQRENGALGRGIDSCSDILELELVNQAIEAVRSEVELEQRRYQELLETARECG
SAEAPVLAPHGPAACPATSLDGDAFPLSFDYNPSGHGLLSPDASYQPTPLAATAEPGCKY
SLASPDRAQGHGGGGGGALEYVPKAVGQPRRYSRPVSSSKYVVDNSKPSTDLEYDPLSNF
SARLLSRASTKDERAPKRPRSSRGSEPYTPAPKKPCDPFGSCDARFSDSDDDAVVAPGDK
SVTTSPPRVQGGAESKAPGKPGSREGPELEEGSLRETKEMAVQCDVEDLGPPPRSPGRPP
LAKPSSPARAAPERSSPKEGRPKKKSGVPPTASHKDSVRKTDKGKDGARGRPAEKPAADR
RGPQAGSPRHKAERPQGTKKKPSSATPVASSGKGRPERPGPLPSPAQGAAHQPSDRIAGK
TLSGKLAERKALSLDEGAPRDAPKLPRRTLSHAELFGDESEDEDPRPQAPATRPLAPPSL
SSSSDSDSDSSLGLSAARGPPKRLKASPPPSSSSSSGAGSDVDYSALEKEVDFDSDPMEE
CLRIFNESTAVKTEDKGRLARQPSKEEKTEDKGHSGLTTLFPGQKRRISHLSKQGKEVEP
TRRGPAPPARPPTAQEVCYRRAQQAQRESAGWLQATQQLSEKPSSVHISAPGEKRRIAHV
PNPLLAAAPTGAKRTLSASSSQPPSGPEPGSQPLKTRTLSGMASKTTTTVAPKRVAHSPS
LQSLKKPIIPKEFGGKVPTVIRQRYLNLFIEECLKFCSSNQEAIEKALNEEKVAYDRSPS
KNIYLNVAVNTLKKLRGLGPGTGAGLNKTSGRRVVSHEVVLGGKLAARTSFSLSRPSSPR
VEDLKGAALYSRLKEYLLTEGQLKENGYPFPHPEKPGGAVIFTAEEKKPKDSSCRICCRC
GTEYLVSSSGRCVREEECYYHWGRLRRNRVAGGWETQYTCCSAAIGSTGCQVAKQHVQDG
RKENLEGFVKTFEKELSGDAHPGVYALDCEMSYTTYGLELTRVTVVDTDLQVVYDTFVRP
DNEIVDYNTRFSGVTEADLADTSISLRDVQAVLLSMFSSDTVLIGHSLESDLLALKVIHS
TVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDASACMHLVIWKIRED
AKTKR
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgctacgctccaccggcttcttccgggccatcgactgcccctattgggctggggcgccc
gggggaccctgccggcggccctactgccacttccggcaccgcggggcccggggcccgggc
gcgcccggcgaaggtggagcggtgtcccccgcagcagggcttggttatgacccgtacaac
cctgagctgcccaagccccccgcacagagggagaatggcgccctgggcagaggcattgat
tcctgctcagacatcctggagctggagctggtcaaccaggccatcgaggctgtgcgctct
gaggtggagctggagcagaggcgctaccaggagctcctggagacggcccgggagtgcggt
tcagctgaggcccccgtcctggcacctcatggccctgctgcctgccccgccaccagcctg
gacggggacgccttcccactgtccttcgattataaccccagcggccatggccttttgagc
cccgatgccagctatcagcccaccccactggctgccaccgctgagcctggctgcaagtat
tcactggcctcgccagatcgggctcagggccatggtggagggggtggcggcgccctggag
tatgttcccaaggccgtgggccagccccggcggtacagccgccccgtctccagcagcaag
tatgtggtggacaactctaagccatctacagacctggagtatgaccccctgtccaacttc
tctgcccgcctgctcagcagggccagcaccaaggacgaaagggcccccaagcggccccgg
agctcccgtggcagcgagccctacacacctgcacccaagaagccctgtgacccctttggc
agctgcgacgccaggttctcggactcggacgatgacgctgttgtcgctccgggtgacaaa
tctgtcaccaccagccccccaagagttcaagggggtgctgagagcaaggccccggggaag
ccgggctccagggaaggccctgaactggaggagggcagccttcgggagaccaaggagatg
gcggtgcagtgtgacgtggaggatctcgggccacctcctcggagcccaggcaggccaccc
ctggctaagcccagctcaccagccagggctgcgccagagcgcagcagccccaaggagggg
aggcctaagaagaaaagtggggtgccacccactgccagccacaaggacagtgtccggaag
acagataagggtaaggatggtgcacgagggaggccggctgagaagcccgctgcagacagg
aggggcccgcaggccggcagccccaggcacaaggcagagcggccccaagggaccaagaaa
aagccatcttcagccactccggtggccagctcagggaaaggccgaccagaacggccagga
ccgttgccgagccccgcacagggggcagcccaccaaccatcagataggatagctgggaag
accctgtcagggaagctggcagagaggaaggccctctcgctggacgagggcgccccccgg
gacgcccccaagctgcccaggcggaccctgagccatgccgagctcttcggggatgagagt
gaggacgaggacccgcggccccaggcgccagccaccaggcctctcgctccccccagcctc
agctccagctcggactcagactcggactccagcctgggcctgtcggctgcgcgggggccg
cccaagcgcctcaaggcctccccacccccctcctcctcgtcctcttcgggggcgggctct
gacgtggactactcggccctggagaaggaggttgactttgactctgaccccatggaggag
tgcctgcgcatcttcaatgagtcaacggctgtcaagactgaggacaagggccgcctggcc
cggcagccctctaaggaggagaagactgaggacaaggggcattcaggcctgaccacgctg
tttcctgggcagaagaggaggatttctcacctctccaagcaaggcaaggaggtggagccc
actaggagaggccctgcaccccctgcccggcccccgaccgcccaggaggtgtgctaccga
cgggcccagcaggcgcagagggagtcagccggctggctccaggccacccagcagctgagt
gagaagccaagctctgtccacatctcggccccaggagagaagcggaggattgcccatgtc
cccaaccccctcctggctgcagcccccacaggcgccaagaggaccctctcggccagcagc
agccagccccccagcggccccgagccaggcagccagcccctgaagacgcgcacattgtcg
ggcatggcgtccaagaccaccaccaccgtggcccccaagcgtgtggcgcatagcccgtcc
ttacagagtttaaagaagcccattatcccaaaagagtttgggggcaaagtccctactgtc
atccgccagcggtatctcaacctgtttattgaagagtgcctcaaattttgctcttctaac
caggaagccatagagaaggcgctcaacgaggagaaggtagcctacgaccgcagccccagc
aagaacatctacctgaacgtggctgtgaacaccctcaagaagctgcgcggcctgggaccg
ggtaccggagctggtctcaacaaaaccagcggccggagggtggtgtcccatgaagtggtg
ctggggggcaagttggctgccaggaccagcttttcgctcagccgccctagcagcccccgt
gtggaggatctgaaaggggccgccctctacagccgcctcaaggagtacctgctcacggag
ggccagctcaaggagaatggctaccccttcccacaccccgagaagcctggtggcgccgtc
atcttcacagccgaggagaagaaacccaaggactcctcctgcaggatctgctgccgctgc
ggcaccgagtacctcgtgtcctcctctggccgctgcgtgcgtgaggaggagtgttactac
cactggggtcggctccgccggaaccgagtggccggtggctgggagactcagtacacgtgc
tgctcagctgccataggctctaccggctgtcaggttgccaagcaacatgtgcaagatggc
cggaaggaaaacttggaagggttcgtgaagacttttgagaaagagctttcaggagatgcg
catccaggagtctacgccctcgactgtgagatgtcctacaccacgtacggcctggagctg
acgcgcgtcacagtggtggacacggacctccaggttgtgtatgacacctttgtcaggcca
gacaacgagattgtcgactataacactaggttttcaggagtgaccgaggctgaccttgca
gacacgagcatctcgctccgggatgtccaggccgtgttgcttagcatgttcagctcagac
accgtcctcatcggtcacagtctggagagcgacctgctggccttgaaggtcatccacagc
accgtggtggacacgtctgtgttattcccacatcgcctgggcctcccctacaagcgctcc
ctgcggaatctcatggccgactacctcagacagatcatccaggacaatgtggacgggcac
agctccagcgaggatgccagtgcctgcatgcacctggtgatctggaagatccgagaagac
gccaagaccaagcggtga
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