Bubalus bubalis (water buffalo): 102389988
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Entry
102389988 CDS
T05912
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03030
DNA replication
bbub03410
Base excision repair
bbub03420
Nucleotide excision repair
bbub03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102389988 (RFC2)
03410 Base excision repair
102389988 (RFC2)
03420 Nucleotide excision repair
102389988 (RFC2)
03430 Mismatch repair
102389988 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbub03032
]
102389988 (RFC2)
03036 Chromosome and associated proteins [BR:
bbub03036
]
102389988 (RFC2)
03400 DNA repair and recombination proteins [BR:
bbub03400
]
102389988 (RFC2)
DNA replication proteins [BR:
bbub03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102389988 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
102389988 (RFC2)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102389988 (RFC2)
DNA repair and recombination proteins [BR:
bbub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102389988 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
102389988 (RFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
Viral_helicase1
RCF1-5-like_lid
AAA_24
Mg_chelatase
AAA_11
Rad17
RuvB_N
AAA_assoc_2
nSTAND3
MipZ
AAA_19
AAA_5
DNAX_ATPase_lid
AAA_18
AAA_28
ABC_tran
AAA_25
AAA_30
AAA_23
NTPase_1
MeaB
SLFN-g3_helicase
RNA_helicase
FtsK_SpoIIIE
DUF815
Motif
Other DBs
NCBI-GeneID:
102389988
NCBI-ProteinID:
XP_006057137
LinkDB
All DBs
Position
24:complement(9126128..9139647)
Genome browser
AA seq
352 aa
AA seq
DB search
MEAQESGGGTGECGAQDAAPGPSKAPGSASHYELPWVEKYRPVKLNEIVGNEDTVSRLEV
FAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQ
SRCAVLRYTKLTDAQILARLLSVIEKEKVQYTDDGLEAVIFTAQGDMRQALNNLQSTYSG
FGFINSENVFKVCDEPHPLLVKEMIQHCVSADIDEAYKILAHLWHLGYSPEDIIGNIFRV
CKTFQMAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTMAPVAS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcaggagagcggtggtggcactggcgagtgcggggcccaggacgctgctcca
ggccccagcaaggcccccggcagcgccagccactacgagctgccgtgggttgaaaaatac
agaccagtaaagttgaatgaaattgtcgggaatgaagacaccgtgagccggctggaggtc
tttgcaagggaagggaacgtgcccaacatcattatcgctggccccccgggaaccggcaag
accaccagcatcctgtgtttggcacgagccctgctgggcccggccctcaaggatgcggtt
ttggagctcaatgcctcaaacgacagaggcattgatgttgtgaggaacaaaatcaaaatg
tttgcccagcagaaagtcaccctccccaaaggacggcacaagatcatcatcctggatgaa
gcagacagcatgactgatggagcccagcaagccttgaggaggaccatggagatctactcc
aagacgacccgctttgctctcgcttgtaacgcttcagataaaatcatagagcccattcag
tcccggtgcgccgtcctccgctacacgaagctgaccgacgcgcagattcttgccaggctc
ctgagcgtcatcgagaaggagaaggtccagtacacggatgacggcctggaagccgtcatc
ttcaccgcccagggcgacatgaggcaggcgttgaacaacttgcagtctacttactcggga
tttggcttcatcaacagtgagaatgtgttcaaggtctgtgacgagccccaccccttgctg
gtaaaggagatgatccagcattgtgtgagcgctgacattgacgaggcctacaagatcctt
gctcacctgtggcatcttggctattccccagaagacatcatcggcaacatttttcgagtg
tgtaaaaccttccagatggcagaatacttgaaactggagtttattaaggaaattggatac
acgcatatgaaaatagcggaaggtgtgaactcccttctgcagatggcagggctcctggcc
aggctgtgtcagaagacaatggccccagtggccagttag
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