Bubalus bubalis (water buffalo): 102390032
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Entry
102390032 CDS
T05912
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102390032 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bbub04990
]
102390032 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
bbub04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
102390032 (LDB3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
PDZ_2
DUF3854
Motif
Other DBs
NCBI-GeneID:
102390032
NCBI-ProteinID:
XP_006066669
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All DBs
Position
4:160475874..160535938
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AA seq
723 aa
AA seq
DB search
MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTM
THLEAQNKIKSASYNLSLTLQKSKRPIPISTAAPPIQSPLPVIPHQKDPALDTNSSLAAA
SPHPEARAGPGTPGTPELGQIFSSSFSQTSVFSSHTEASDPGPPRGGPGAKISLEGALDS
LSPKAPLGSSQPRQYNNPIGLYSAETLREMAQMYQMSRRGKASGAGLLGGSLPIKDLTVD
SASPVYQAVIKNQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRRSST
PIEHAPVCTSQAATPLLPASAQSPAAASPSTASPPPATAAAHAATASATAPASSPADSPR
PQASTYSPAAATSPAPAAHTYSEAPAAPAPKPRVVTTASIRPSVYQPVPASTYSPSPGAN
YSPTPYTPSPAPAYTPSPTPAYTPSPAPTYSPSPAPAYTPSPAPSYNPTPYSGGPAESAS
RPPWVTDDSFSQKFAPGKSTTTVSKQSLPRGAPAYTPPPPAPQVSPLARGTVQRAERFPA
SSRTPLCGHCNTIIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQ
FFAPVCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNL
FSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHA
INV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagcgtgaccctgacggggcctgggccctggggcttccgcctgcagggcggt
aaggacttcaacatgccgctcaccatctcccggatcacaccaggcagcaaggccgcccag
tcccagctcagccagggtgaccttgtagtggccattgacggcgtcaacacagacaccatg
acccacctggaggcccagaacaagatcaagtctgccagctacaacctgagtctcacactg
cagaagtcgaagcgtcccattcccatctccacggcagcgcccccgatccagtcccctctg
ccagtgatcccgcaccagaaggaccctgctctggacacgaacagcagcctggcagcagcc
agcccccaccccgaggcgagggccggcccgggcaccccaggcaccccggagctcgggcag
atctttagctcctccttctctcagacctccgtcttctcctcacacacggaggcctctgac
cccggccctccccggggaggccccggggccaagatcagcctggagggggccctggactcg
ctcagcccgaaagccccgctgggctcgagccagccaaggcagtataacaaccccattggc
ctgtactcggcagagaccctgagggagatggctcagatgtatcagatgagccgccgaggg
aaggcctcaggtgctggactcctaggagggagccttcctatcaaagacctcaccgtggac
agcgcctctcctgtgtatcaggctgtgattaagaaccagaacaagccggaagatgaggct
gacgagtgggctcgccgctcctccaacctacagtctcgctccttccgcatcctggcccag
atgacggggacagaatacatgcaagaccctgatgaagaagctttgcgaaggtcaagcacc
cctattgagcatgctccagtgtgcaccagccaggccgccaccccactgctgcccgcttct
gcccagtcgcctgctgctgcctctcccagcacagcctcgccacccccggccacagctgct
gcccatgctgccaccgcctctgccacagcccctgcctcaagccctgcggacagtccaagg
ccccaggcctccacctacagtcctgctgcggccacctctccagcacctgctgcccataca
tacagcgaggccccagctgcccctgcacccaagccccgggttgtcaccaccgccagcatc
cggccttctgtctaccagccagtgcctgcgtctacctacagcccatccccgggggccaat
tacagtccaaccccctacacgccctcccctgcccctgcctacaccccgtcccctacccct
gcgtacaccccttcccctgctcccacctattccccctccccagcaccagcctacaccccc
tcgccagccccaagctataatcctacaccctatagcgggggccctgcggagtctgccagc
cgtcccccatgggtgacagacgacagcttctctcagaagtttgcccctggcaagagcacc
accactgtgagcaagcagagtctgccccgaggcgcccctgcctacaccccgccgccacca
gctccccaggtgtccccccttgccaggggtacggtgcagagggccgagcgcttcccagcc
agcagccggactccgctctgtggccactgtaacaccatcatccggggcccctttctggta
gccatgggccgttcctggcatccagaagagttcaactgtgcctactgcaagacctccctg
gcagatgtgtgctttgtggaggagcagaacaacgtttactgtgagcggtgttatgagcag
ttctttgcccccgtctgtgccaagtgtaacaccaaaatcatgggggaagtgatgcatgcc
ttgaggcagacgtggcataccacctgcttcgtctgtgcagcctgcaagaagcccttcggg
aacagcctcttccacatggaagacggggagccctactgtgagaaagactacgtcaatctg
ttcagcaccaagtgtcacggctgtgacttccccgtggaggccggtgacaagtttatcgaa
gccctgggccacacctggcatgacacctgcttcatttgtgcggtctgccacgtgaatctg
gaggggcagccattctactccaagaaggacaaacccctgtgcaagaagcatgcacacgcc
atcaacgtgtag
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