KEGG   Bubalus bubalis (water buffalo): 102390222
Entry
102390222         CDS       T05912                                 
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102390222 (U2AF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bbub03041]
    102390222 (U2AF1)
Spliceosome [BR:bbub03041]
 Complex A
  U2 snRNP components
   U2 related factors
    102390222 (U2AF1)
 Complex B
    102390222 (U2AF1)
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 102390222
NCBI-ProteinID: XP_045022491
LinkDB
Position
1:complement(188113020..188125941)
AA seq 237 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGRERDRRRSRDRERSGRF
NT seq 714 nt   +upstreamnt  +downstreamnt
atggcggagtatttggcctccatcttcggcaccgagaaagacaaagtcaactgttcattt
tatttcaaaattggagcatgtcgtcatggagacagatgctctcggttgcacaataaaccg
acctttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgcgctgtgagcgatgtcgagatgcaggaacattatgatgag
ttctttgaggaggttttcacagaaatggaggagaagtatggggaggtggaggagatgaac
gtctgtgacaacctcggagaccacctcgtggggaacgtgtatgtcaagtttcgccgtgaa
gaagacgcggaaaaggctgtgattgacttgaacaaccgctggtttaatggccagccgatc
cacgccgagctctcccccgtgaccgacttcagagaagcctgctgccgccagtacgagatg
ggggagtgcacgcggggcggcttctgcaacttcatgcacctgaagcccatctcccgggag
ctgcgacgggagctgtatgggcgccggcgcaagaagcatagatcgcggtcccgctcccgg
gagcgtcgctctcggtctcgagaccgtggtcgcggcggcggaggtggcggtggcggagga
cgggagcgcgacaggaggcggtcgagagaccgggagcggtctgggcgattctga

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