Bubalus bubalis (water buffalo): 102390242
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Entry
102390242 CDS
T05912
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102390242 (COL25A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bbub00536
]
102390242 (COL25A1)
Glycosaminoglycan binding proteins [BR:
bbub00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102390242 (COL25A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102390242
NCBI-ProteinID:
XP_045022246
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Position
7:91265726..91751605
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AA seq
632 aa
AA seq
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MLVKKQAGKGGGREPGSEDRSPAGQRCARPVSPCAALATLLSVVAVMSCLYLGVKTNDLQ
ARIAALESAKGDPSIRLLPDCVDQLKAMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC
PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ
LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGMPGEPGKPGEQGLMGPLG
PPGQKGSVGVPGIPGMNGQKGEPGLPGAVGQNGIPGLKGEPGEQGVKGDAGENGPKGDTG
EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT
KGERGEAGPPGRGDRGEPGAPGPKGKQGESGTRGPKGSKGDRGDKGDSGALGPRGPPGQK
GDPGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEPGSPGVPGVDGEQGL
KGSKGDMGDPGMPGEKGGIGLPGLPGANGMKGEKGDSGLPGPQGPSVIGPPGPPGPHGPP
GPMGPHGLPGPKGASGLDGKPGSRGTDGPMGPHGPAGPKGERGEKGATGEPGPRGPYGLP
GKDGEPGLDGFPGPRGEKGDLGEKGEKVTSPT
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaagaagcaagcagggaaaggaggggggcgggagccgggctcagaggaccgg
agcccagccgggcagcgttgtgcccgccccgtgtcgccgtgcgcggccctggcgaccctc
ctgtcggtggtggccgtgatgtcttgtctgtacctgggggtgaaaaccaacgacctccag
gcgaggatcgctgccctcgagtctgccaaaggagacccttccatccgtctgctgcctgat
tgtgtggatcagctcaaagcaatggtgcaagagaaagtggagcgacttctggctcagaag
tcctatgaacatatggctaaaataagaatcgcgagagaagcaccttcagaatgcaattgc
ccggcaggtcctccagggaaacgaggtaagaggggccgaagaggagaatctggtcctcct
ggtcagcctggtcctcagggccctcctggtccaaaaggtgataagggagaacaaggtgat
cagggacctcggatggtgtttcctaaaatcaatcatgggtttctctctgctgatcagcag
ctcattaaacgccgcctgattaagggtgaccaaggtcaggctgggccgccaggccctcca
ggcccaccgggcccaagagggccgcctggggacacagggaaggatggccctcgcggaatg
ccaggcatgcccggtgaaccagggaaaccaggagaacaaggcttgatgggtcctctggga
cctccaggacaaaagggttctgttggagtacctggaattccagggatgaatggacaaaag
ggtgaacccgggttacctggagcagtaggacagaatggaataccagggctaaagggagaa
cctggagaacaaggagtaaagggagatgctggagagaatggccccaaaggtgacacaggc
gaaaagggtgacccaggatcatctgctgcaggaattaagggagaacccggagaatctggt
cgtccagggcaaaagggtgaaccagggcttcctgggcttcctggacttccggggataaag
ggagaaccaggtttcattggtcctcagggagaaccaggcttaccagggttaccaggaacc
aagggtgaacgtggggaggcagggcctcctggacgaggggatcgaggggagcccggagcc
cctggaccgaagggcaaacaaggtgaatcaggaactagaggcccgaaagggtcaaagggc
gatcgtggagacaagggggactctggagccctgggaccaaggggtccacctggtcaaaag
ggagatccaggagccaccgagatcatagactacaatggcaacctccacgaagccttgcag
aggattaccaccttaacagtcacgggtccccctggaccacctggacctcaaggactacaa
gggccaaagggagaaccaggatctccaggagtcccaggagttgatggagagcagggactc
aaaggctcaaagggagacatgggggacccaggtatgccaggtgaaaaaggaggaattgga
cttcctggactaccgggtgccaatggaatgaaaggagaaaaaggagactcgggattgcca
ggtcctcagggcccttctgtcataggcccaccaggcccaccaggtccccatggcccacca
ggccccatgggaccccatggacttcctggaccaaagggagcatctggcttagacggaaag
ccaggatcccggggtacagatggccctatgggaccccatggccctgcaggtcccaaagga
gaaagaggtgaaaaaggagctacgggagagccgggaccccgagggccgtatggtctgccc
gggaaagatggagagcctggtcttgatggtttccctggtccgcgaggcgagaagggtgac
ctgggagaaaagggggaaaaggtgacctctccaacctag
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