Bubalus bubalis (water buffalo): 102390306
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Entry
102390306 CDS
T05912
Symbol
SART1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102390306 (SART1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbub03041
]
102390306 (SART1)
04121 Ubiquitin system [BR:
bbub04121
]
102390306 (SART1)
Spliceosome [BR:
bbub03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
102390306 (SART1)
Ubiquitin system [BR:
bbub04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102390306 (SART1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
DUF2982
Motif
Other DBs
NCBI-GeneID:
102390306
NCBI-ProteinID:
XP_006056495
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All DBs
Position
5:125543868..125557772
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AA seq
803 aa
AA seq
DB search
MGSSKKHRGEKEAAGTTAAASTGGATEQPPRHREHKKHKHRSSGGGGSSGGERRKRSRER
GSERGSGRRGAENEARSSTHGRERSQTEPSERRVKREKRDDGYEAAASSKTSSGDASSLS
IEETNKLRAKLGLKPLEVNAVKKEAGTKEEPVTADVINPMALRQREELREKLAAAKEKRI
LNQKLGKIKTLGEDDPWLDDTAAWIERSRQLQKEKDLAEKRAKLLEEMDQEFGVSTLVEE
EFEQRRQDLYSARDLQGLTVEHAIDSFREGETVILTLKDKGVLQEEEDVLVNVNLLDKER
AEKNVELRKKKPDYLPYVEDESVDDLAQHKPRSILSKYDEELEGERPQSFRLEQGGVADG
LRERELEEIRAKLRLQAQSLSTVGPRLASEYLTPEEMVTFKKTKRRVKKIRKKEKEVIMR
ADDLLPLGDQTQDGDFGSRLRGRGRRRVPEADEEPQEEGEKEPVAQPPPSDDTRVESMDI
SDDEEGAAPQSGSPEVLEEDEAELELQKQLEKGRRLRQLQQLRDGGEKVVEIVKRLESRQ
RGWEEEDPERKGAIVFNATSEFCRTLGEIPTYGLAGNREDQEELMDFERDEERSANGGSE
SDGEENMGWSTVNLDEEKQQQDFSASSTTILDEEPIVNRGLAAALLLCQNKGLLETTVQK
VARVKAPNKSLPSAVYCIEDKMAIDDKYSRREEYRGFTQDFKEKDGYKPDVKIEYVDETG
RKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLGTVALLQEKQK
AQKTPYIVLSGSGKSMNANTITK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgtcaaagaagcaccgcggggaaaaggaggcggcaggaactacagcagcggcc
agcaccgggggcgctaccgaacagccgcctaggcaccgggagcacaaaaaacacaagcat
cggagcagcggcggcggcggcagcagcggcggcgaacgacggaagcgaagccgagagcgg
gggagcgagcgcgggagcgggcggcgcggggccgaaaatgaggcccgcagcagcacgcac
gggcgggagcgcagccagacagagccctccgagcggcgcgtgaaacgagagaagcgggat
gatggctacgaggccgctgccagctccaaaactagctcaggcgatgcctcgtcactcagc
atcgaggagaccaataaactccgggcaaagttggggctgaaacccttggaggtcaatgcc
gtcaagaaggaggcgggcaccaaggaggagcccgtgaccgccgatgtcatcaaccccatg
gctttgcgacagcgagaggagctacgagagaagctggcggctgccaaagaaaagcgcatc
ctgaaccaaaaactggggaagattaagaccctgggggaggacgacccctggctggatgac
accgcggcctggatcgagaggagccggcagcttcaaaaggagaaggacttggcagagaag
agggccaagctgctggaggagatggaccaggagtttggtgtcagcaccctggtggaagag
gagttcgagcagagacggcaggacctgtacagcgcccgggacctgcagggcctcactgtg
gagcatgccatcgactccttccgcgagggggagacggtgatcctcaccctcaaggacaaa
ggagtgctgcaggaggaggaggatgtgctggtgaatgtgaacctgctggacaaggagcgg
gcggagaagaacgtggagctgcgcaagaagaagcccgactacctgccgtacgtggaggac
gagagcgtggacgacttggcccagcacaaacctcgctctatcctgtccaagtacgacgag
gaactcgaaggcgagcggccgcagtccttccgactggagcagggcggcgtggctgacggc
ctccgggagcgggagctagaggagatccgtgccaagctgcggctgcaggcccagtccctg
agcacggtcggaccacgacttgcctctgagtacctcacgccagaggagatggtgaccttt
aaaaagaccaagcggagagtgaagaagatccgcaagaaggagaaggaggtgatcatgcgg
gccgatgacctgctgccacttggggaccagactcaggatggggacttcggttccagactg
cggggccgggggcggcgccgggtgcctgaggcggacgaggagccccaggaggagggggag
aaggagcccgtggctcagccgccaccgtcagatgatacccgtgtggagagcatggacatc
agtgatgatgaggagggtgctgcgccgcagtctgggtccccagaggtgctggaggaggac
gaggcggagctggagctgcagaagcagctggagaaggggcgccgccttcggcagctgcag
cagctccgggacggcggcgagaaggtggtggagatcgtcaagaggctggagtctcggcag
cggggctgggaggaggaggacccagagcggaagggggccatcgtgttcaacgccacgtct
gagttctgccgcactctgggggagatccccacctacgggctggccggcaaccgggaggac
caggaagagctcatggactttgaacgggatgaggagcgctcagccaacggcggctccgag
tctgacggggaggagaacatgggctggagcaccgtcaacctggacgaggagaagcagcag
caagacttctctgcctcctccaccaccatcctggacgaggagcccatcgtgaatagaggg
ctggcggccgccctgctcctgtgtcagaacaaagggctgctggagacaacggtgcagaag
gtggcccgggtgaaggcgcccaacaagtccctgccgtcggctgtgtactgcatcgaggac
aagatggccatcgatgacaagtacagccggcgggaggagtaccgcggcttcacccaggac
ttcaaggagaaggacggctacaaacccgacgtgaagatcgagtacgtggacgagacgggc
cggaagctcacacccaaggaggctttccggcagctgtcccaccgcttccatgggaagggc
tctggcaaaatgaagacagagcggcggatgaagaagctggacgaggaggcgctcctgaag
aagatgagctctagcgacacgcccctgggcaccgtggctctgctccaggagaagcagaag
gcccagaagaccccgtacatcgtgctcagcggcagcggcaagagcatgaacgcgaacacc
atcaccaagtga
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