Bubalus bubalis (water buffalo): 102390404
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Entry
102390404 CDS
T05912
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
102390404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102390404
Membrane trafficking [BR:
bbub04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
102390404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Laminin_II
YqjK
OmpH
Fusion_gly
DUF6720
DUF745
DUF5616
Motif
Other DBs
NCBI-GeneID:
102390404
NCBI-ProteinID:
XP_044792297
LinkDB
All DBs
Position
2:complement(123316439..123317409)
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AA seq
232 aa
AA seq
DB search
MATSAASSEHFEKLHEIFCGLHEDLRGVPERLLGMAGTEEKKKLIRDFDEKQQEANETLA
EMEEELRYAPLSFRNPMMSKLRTYRKDLAKLHREVRSTPLTATPGARGDMKYGTYAGENE
HMNRLQSQRALLLQGTDSLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSR
LVNTSENLSKSRKILRSMSRKVTTNKLLLSIVILLELAILGGLVYYKFFRRH
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggccacctccgccgcctcctcggagcatttcgagaaactgcacgagatcttctgcggc
ctccatgaagacctacgaggggtgccggagcggctcctggggatggcagggacagaagag
aagaagaagttgatcagagatttcgatgaaaagcaacaggaagcaaatgaaacgctggca
gagatggaagaggaactgcgttatgcacccctgtcttttcgtaaccctatgatgtctaag
ctgcgaacctaccggaaggaccttgccaaactccatcgggaagtgagaagtacacctttg
acagccactcctggggcccgaggagacatgaaatatggcacatacgctggggagaacgag
catatgaatcggctacagtctcaaagggcattgcttctgcaaggcactgacagcctgaat
cgggccacccagagtattgagcgttctcatcgtattgctgcagagactgaccagattggc
tcagaaatcatagaagagctgggggagcaacgtgaccagttggaacgtaccaagagtaga
ctggtaaatacaagtgaaaacttgagcaaaagtcggaagattctccgctcaatgtccaga
aaagtgacaaccaacaagctgctgctttccatcgtcatcttactggagctagccattctg
ggaggcctggtttattacaaattctttcgcaggcattaa
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