Bubalus bubalis (water buffalo): 102390457
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Entry
102390457 CDS
T05912
Symbol
SAMD4A
Name
(RefSeq) protein Smaug homolog 1 isoform X3
KO
K27396
protein Smaug
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102390457 (SAMD4A)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102390457 (SAMD4A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAT_SMAUG
SAM_1
Vts1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
102390457
NCBI-ProteinID:
XP_006064927
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All DBs
Position
11:complement(36072842..36300065)
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AA seq
630 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLEG
EANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGGQNRGRSDSVDYGQTHYYHQR
QNSDDKLNGWQNSRDSGICINASNWQDKSLGCENGHVPLYPSSSVPTTINTIGTSASTNV
PAWLKSLRLHKYAALFSQMTYEEMMALTECQLEAQNVTKGARHKIVISIQKLKERQNLLK
SLERDIIEGGNLRLPLQELHQMILTPIKAYSSPSTTPEARRREPQAPHPPSLMGPDSQSP
DCKDSATAAGATATTSAGASGGLQPHQLSSCDGELAVTPLPEGDLPGQFTRVMGKVCTQL
LVSRPDEENISSYLQLIDKCLIHEAFTETQKKRLLSWKQQVQKLFRSFPRKTLLDISGYR
QQRNRGFGQSNSLPTTSSVGGGMGRRNPRQYQIPSRNVPSARLGLLGTSGFVSSTQRNTA
ANPTIMKQGRQNLWFANPGGSNSMPSRTHSSVQRTRSLPVHTSPQNMLMFQQPEFQLPVT
EPDINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgaccaggtcggggtgctggcgggctggtttaagggctggaacgagtgc
gagcagaccgttgcgctgctgtcgctgctcaagcgcgtgagccagacccaggcccgcttc
ctccagctttgcctggagcactcgctggccgactgcgccgagctgcacgtcctcgaaggc
gaggccaacagtccgggaatcattaaccaatggcaacaggaatccaaggataaagtgatt
tccctcctgttaactcacctgcctttgctgaagccaggaaacctcgacgcaaaagtagag
tatatgaaactgctgcccaaaatcctggcacactccattgaacacaaccagcatatcgag
gagagcaggcagctgctgtcctatgctttgatccatccggccacttcattggaagaccgc
agtgctttggccatgtggctgaaccacttggaggaccgtacgtcgaccagctttggcggc
cagaaccgaggccgctcggactctgtggattatgggcagacacactactatcaccaaaga
cagaactccgatgacaagcttaatggatggcagaactctcgggattctgggatttgcatc
aatgcctccaactggcaggacaaaagtctggggtgtgagaacggccacgtgcccctctac
ccatcttcatccgtccccaccacaatcaatacgattggaaccagcgcaagcacaaatgtt
ccagcctggttaaaaagcctccgcctgcacaagtacgccgcactcttctcccagatgacc
tacgaggagatgatggccctcactgagtgccagctggaggctcagaatgttaccaaaggc
gcaagacacaaaattgtcatcagtattcagaagctcaaagagagacaaaatctcctgaag
tctttggaaagggacatcattgaggggggcaacctgcgcctcccgctccaggagctgcac
cagatgatcctgacccccatcaaggcgtacagctcaccgagcaccaccccagaggctcgc
cgccgggagccccaggccccgcacccgccttcgctgatgggccccgacagccagagcccg
gactgcaaagacagtgccacggccgcgggagccacggccaccacttcggctggggcaagt
ggcgggctccagccacaccagctgagcagctgtgacggggagctggctgtcacccccctg
ccggagggggatctccccgggcagttcacacgtgtcatggggaaagtgtgcacacaactc
ttggtctccagacccgatgaggaaaatataagttcctatttacagctcatagacaaatgt
ctaatccatgaggcatttacagagacacagaaaaaaagattgttgtcatggaaacagcag
gtgcagaagctctttcggtctttccctcggaaaacccttctagacatatcaggatatcga
cagcaaagaaaccgtggctttgggcaatccaactccctcccgacaaccagctcagtgggt
ggtggcatgggcagacggaatccacgccagtaccagatcccctcccggaatgtcccttcc
gcccgccttggcctcttgggcaccagcggattcgtcagctctacccagcgcaataccgca
gccaaccccaccatcatgaagcaaggaagacagaacctctggttcgccaaccccgggggc
agcaacagcatgccaagccgcacccacagctctgtccaaaggacccgctcactgcctgtg
cacacttcgccacagaatatgctgatgttccagcagccagaattccagcttccggtgact
gaacctgacatcaacaacaggctggagtccttgtgcctcagtatgaccgagcatgccctg
ggagacggggttgaccggacctccacaatctag
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