Bubalus bubalis (water buffalo): 102390483
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Entry
102390483 CDS
T05912
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04622
RIG-I-like receptor signaling pathway
bbub05161
Hepatitis B
bbub05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102390483 (DDX3X)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102390483 (DDX3X)
09172 Infectious disease: viral
05161 Hepatitis B
102390483 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102390483 (DDX3X)
03041 Spliceosome [BR:
bbub03041
]
102390483 (DDX3X)
03036 Chromosome and associated proteins [BR:
bbub03036
]
102390483 (DDX3X)
Enzymes [BR:
bbub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102390483 (DDX3X)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102390483 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
102390483 (DDX3X)
Spliceosome [BR:
bbub03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102390483 (DDX3X)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102390483 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102390483
NCBI-ProteinID:
XP_006048761
LinkDB
All DBs
Position
X:40537136..40551986
Genome browser
AA seq
661 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW
SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRGRGDYDGIGGRGDRGGFGKYE
RGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIES
FSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQ
IYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVY
GGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQI
RRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVW
VEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDRE
EALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLA
TSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGARD
YRQSSGGSSSSFSSSRASSSRSGGGGHGSSRGFGGGGYGSFYNSDGYGGNYNSQGVDWWG
N
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgctcgggctggaccagcagtttgctggcctagac
ctgaactcttcagataatcagagtggaggaagtacagccagcaaagggcgctatattcct
cctcacttaaggaacagagaagctactaaaggattctatgataaagacagttcagggtgg
agttctagtaaagataaggatgcatacagcagttttggttcccgtagtgattcaagagga
aagtctagtttcttcagtgatcgtggaagtggatcaaggggaaggtttgatgatcgtgga
cgaggtgactatgatggcattggcggccgtggtgacagaggtggttttggcaaatatgaa
cgtggaaatagtcgctggtgtgacaaatcagatgaagatgattggtcaaaaccactccca
ccaagtgaacgcttggaacaagaactcttttctggaggcaacactgggattaactttgaa
aaatatgatgacattccagttgaggcaacaggcaacaactgtcctccacacattgaaagt
ttcagtgatgttgagatgggagaaattattatgggaaacattgagcttactcgttacact
cgcccaactccagtgcaaaagcatgctattcctattatcaaagagaagagagacttgatg
gcctgtgcccaaacagggtctggaaaaactgcagcatttctcttgcccatcttgagtcag
atttattctgatggtcccggtgaggctctgagggccatgaaggaaaatggaagatacggg
cgccgcaaacaatacccaatctctttggtgttagcaccaactagagaattggccgtacag
atctatgaggaagccaggaaattttcataccgatctagagttcgtccttgcgtggtttat
ggtggtgctgatattggtcagcaaattcgagacttagaacgtggatgccatttattagtt
gcgactccaggacgtctagtggatatgatggaaagaggaaaaattggattagacttctgc
aagtacttggtgttagatgaagctgatcggatgttggatatggggtttgaacctcagata
cgtagaatcgttgaacaagatactatgccaccaaagggagttcgccacactatgatgttt
agtgctactttccctaaggaaatacagatgcttgctcgtgacttcttggatgaatatatc
tttttggccgtaggaagagttggctctacctctgagaacataacacagaaagtagtttgg
gttgaagagtcagacaaacggtcatttctgcttgatcttctaaatgcaacaggcaaagat
tcactgaccttagtgtttgtggagaccaaaaagggtgcagattctctggaggatttctta
taccatgaaggatatgcttgtaccagtatccatggagaccgatctcagagagatagagaa
gaggcccttcaccagttccgctcaggaaaaagcccaattctcgtggctacagcagtagca
gcaagaggactggacatatcaaatgtgaaacatgttatcaattttgacttgccaagtgat
attgaagaatatgtacatcgcattggccgtacaggacgtgtaggaaaccttggccttgcc
acctcattctttaatgagaggaacataaatattaccaaggatttgttggatcttcttgtt
gaagctaaacaggaagtgccatcttggttagaaaacatggcttatgaacaccactacaag
ggtagcagtcgtggacgatccaaaagtagtagattcagtggaggatttggtgccagagac
tatcgacagagtagtggtggcagcagttccagcttcagcagcagccgcgccagcagcagc
cgcagtggtggaggcggccatggaagcagcagagggtttggtggaggtggctatggaagc
ttttacaacagtgatggatatggaggaaattataactcccagggggttgactggtggggt
aactga
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