Bubalus bubalis (water buffalo): 102390541
Help
Entry
102390541 CDS
T05912
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102390541 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102390541 (THOC6)
03041 Spliceosome [BR:
bbub03041
]
102390541 (THOC6)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102390541 (THOC6)
Spliceosome [BR:
bbub03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102390541 (THOC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IP5PC_F
EIF3I
NBCH_WD40
WDR54
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_EIPR1
PQQ
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
102390541
NCBI-ProteinID:
XP_044791516
LinkDB
All DBs
Position
24:complement(39744802..39747777)
Genome browser
AA seq
341 aa
AA seq
DB search
MERAAQQAVPLGQMEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPMVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEILKKGCKELWRRQPPY
RTSLEVPEINALLLVPKENLLILAGGDCQLHAMDLETGTFMWALPGHTDYIHCLALRERS
PEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTVFPMRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagcggcgcagcaagcggtgcctctgggtcagatggaagtgtttcaggccttg
cagcggctgcacatgaccatattctcccagagcgtctcaccttgtgggaagttcctggca
gctggcaacaattatggacagatagctatctttagcttgtctgctgctttgagctccgag
gccaaagaggaaagtaagaagcctatggtgaccttccaagctcatgacgggccagtctac
agcatggtctccaccgatcgacatctgctgagtgctggggatggggaggtgaaggcctgg
ctttgggcggagatccttaagaagggctgtaaggagctgtggcgtcgtcagcccccatac
aggaccagcctggaagtacctgagatcaatgctctgcttcttgtgcccaaggagaatttg
ctcatcctggcggggggcgactgccagctgcatgcgatggaccttgagacagggaccttc
atgtgggccctcccgggccacacggactacatccactgcttggcactgcgggagcggagc
cccgaggtgctgtcgggcggcgaggatggggccgtgcggctttgggacctgcgcacagcc
aaggaggtccagacaatcgaggtctacaagcacgaggagtgctcgaggccccacaatggg
cgctggattggatgtttggcaactgactcggactggatggtctgcggaggaggcccagca
ctcaccctctggcacctccgatcctccacacccaccaccgtcttccccatgcgggcgcca
cagaagcacgtcaccttctaccaggacctgattctatcagctggacagggccgctgtgtc
aaccagtggcagctgagtggggagctcaaggcccaagtgcctggctcctccccgggactg
ctaagcctcagcctcaaccagcaaccagcagcccctgagtgcaaggtcctgacagctgcg
ggcaacagctgcagagtggacgtcttcactaatctgggctaccgagctttctctctgtcc
ttctga
DBGET
integrated database retrieval system
