Bubalus bubalis (water buffalo): 102390661
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Entry
102390661 CDS
T05912
Symbol
HPS1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X2
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102390661 (HPS1)
Membrane trafficking [BR:
bbub04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
102390661 (HPS1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_2
Fuz_longin_3
Motif
Other DBs
NCBI-GeneID:
102390661
NCBI-ProteinID:
XP_025130198
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Position
23:complement(19703135..19728439)
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AA seq
669 aa
AA seq
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MKCVLVATESAEVLFYWTDEEFEESLRLKFGQTENEGEKPPALEDQLSTLLAPVIISSMT
MLEKLSDTYTCFSTENGSYLYVLHLFGECLFIAINGDHTEGEGDLRQKLCVLKYLFEVHF
GLVTVDGQLIRKELRPPDLEQRVQVWERFQSLLWTYSRLRDQEQCFAVEAVERLIHPQLC
ELCIEALERHVVQAVNSSPGRAGEEALHAFLLVHSKLLAFYSSHNASSLRPADLLALILL
VQDLYPSESTAEDSDPQPSPRRLHRSQSIPVQQAWSSCSADPTRNSAGTETDSFSPTEEY
FTPAPSPGEQSSGPSGPRRIFLDASVKDSYCPLVPHTMYCLPLWPGISMVLLTKCPSTAL
ALALYQLLDGFSQLEKKLKEGQEAGSALRSHPIMVDLRQRMDKFVKNRGGQELQKTWLEF
KTKAFSKSEPGSSWELLQACRKVKRQLCAIYRFSFLTMAPGRGGPHLPQHLQDQVQTLMQ
EKLADWKDFLLVKSRRNVTMVSFLEDFPGLVHFIYVDRTTGQMVAPSLSSSERTSSELGR
GPLATFVKTKVWSLIQLARRYLQKGYTTLLFREGDFCCSYFLWFENDMGHKLQIMEVPVL
SDDSAPVGMLGGDYYRKLLRYYSKGHPAEAVRCHELLALHLSVVPTDVLVQQAGELAQRL
GEASRVHLL
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcgtcttggtggccacagagagtgcggaggtcctcttctactggacagatgag
gagtttgaagagagtctgcgcctgaagtttggacagacagagaatgagggagagaagcct
cccgccctggaggaccagcttagcaccctcctggcccctgtcatcatctcctctatgacc
atgctggagaagctctcagacacatatacctgcttctcaacggaaaatggcagctacctg
tatgtccttcacctgtttggagaatgcctattcatcgccatcaacggagaccacacagag
ggtgaaggggaccttcggcagaagctgtgcgtgctcaagtacctgttcgaggtgcacttc
gggctggtgactgtggatggacagctcatccgaaaggagctgcggcccccagacttggag
cagcgtgtgcaggtgtgggagcgcttccagagcctgctgtggacctacagccgcctgcgg
gaccaggagcagtgcttcgccgtagaggctgtggagcggctgatccaccctcagctctgt
gagctgtgcatcgaggcactggagcggcacgtcgtccaggccgtcaactccagccccggg
cgggctggcgaggaggccctgcacgccttcctgctcgtgcactccaagttgctggctttc
tactccagccacaacgccagctccctgcgcccagccgacctcctggccctcatcctcctg
gtgcaggatctctaccccagcgagagcacagcagaggacagcgacccccagccttcccca
cggaggctccaccgcagccagagcatccccgtgcagcaggcctggagctcctgttctgca
gacccaaccaggaattctgcggggaccgagacagacagcttctccccgactgaagagtac
ttcacaccagctccttcccccggagagcagagttcaggaccctctggccccagaaggatt
ttcctggatgccagcgtgaaagacagctactgccccctggtgccccacaccatgtactgc
ctgcccctgtggccgggcatcagcatggtgctcctgaccaagtgccccagcacggccctg
gccctggccctgtaccagctgctggatgggttttctcaattggagaagaagctgaaggag
gggcaagaggctgggagtgccttgcgttcccaccccatcatggtggacctccgccagagg
atggacaagtttgtcaagaatcgaggtgggcaagaacttcagaaaacctggctggagttc
aagaccaaggccttctccaaaagtgagcccggctcatcctgggagctgctccaggcatgc
aggaaggtaaagcggcagctatgcgccatctatcggttcagcttcctgaccatggccccg
ggccgggggggcccccacctgccccagcacctgcaggaccaagtccagacactcatgcaa
gaaaagctggcggactggaaggacttcctgctggtgaagagcaggaggaacgtcaccatg
gtgtccttcctggaagacttcccaggcctggtgcatttcatctacgtggaccgtaccact
ggtcagatggtggccccttccctcagcagcagtgagaggacttcatcggagctgggccgg
gggcccctggccaccttcgtcaaaaccaaggtctggtctctcatccagctggcgcgcaga
tacctgcagaagggctacaccacgctgctgttccgcgagggggacttctgctgctcctac
ttcctgtggttcgagaacgacatgggtcacaaactccagatcatggaggtgcctgtgctg
tctgatgactcagctcccgtcggcatgctgggaggagactactacaggaagctcctgcgg
tattacagcaagggccacccggccgaggctgtcaggtgccacgagctgctggccctccac
ctgtcggttgtgcccacggacgtgctggtgcagcaggccggcgagctggcccagcgcctg
ggcgaggcttcccgggtccacctgctctag
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