Bubalus bubalis (water buffalo): 102391043
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Entry
102391043 CDS
T05912
Symbol
DHX57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57 isoform X2
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
bbub03012
]
102391043 (DHX57)
Enzymes [BR:
bbub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102391043 (DHX57)
Translation factors [BR:
bbub03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102391043 (DHX57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
RWD
DEAD
HA2_C
zf-CCCH_4
zf-CCCH
HA2_N
Torus
zf_CCCH_4
nSTAND3
zf-CCCH_2
AAA_19
AAA_22
AAA_14
NPHP3_N
UBA
NB-ARC
Rad17
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
102391043
NCBI-ProteinID:
XP_044781777
LinkDB
All DBs
Position
12:complement(20894063..20958455)
Genome browser
AA seq
1402 aa
AA seq
DB search
MLEERYQVWISARSWIYGVKMSSSVRRKGKPGKGGGKGSSRGGRGGRSHASKSHGGGSSG
GGVGGNRKASSRIWDDGDDFCIFSESRHSSRPSNSSVRKGDGRPKWKPEAKVPLQTLHMT
SENQEKVKALLRDLQEQDADAGSEGVSGEEEDDEPDYDDEQYWSPGREASLVPDSDPLEC
AGSGLVEPHNPEFTVSAFAVHRLSRYGFHTEHCQAALRICDGDVGASLERLLTQCFSETF
GERMKISEAVAHMSLDECVEQRQEEAFALKSICGEKFIERIQNRVWTIGLELEYLTSKFC
KFKQKESTKNTQEASLEVCKFYLKGNCKFGSKCKFKHEVPPNQIVGRVERNVDDSHLNAN
EDASFLYELEIRFSKDHKYPYQAPLVAFYSTNENLPLACRLHISEFLYGKALTFAETSEP
VVYSLITLLEEESEITKLLTNTHHKYSVPPVNFLPVSPGTRLNNPVCRKPVIPSNSFFSN
QIPEVEKESEPEEETDEDEGPAPVMVENESYVNLKKKISKRYDWQAKSVHAENVKICKQF
RIKQASRQFQSVLQERQSLPAWEERENILKLLSKHQVLVISGMTGCGKTTQIPQFILDDS
LNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCT
TGVLLRRLEGDTALQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILMSATLNA
ELFSEYFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYARSMKQMSKEKLKARR
SRTAFEEVEEDLRLSLHLQGQDSVKDAVPDQQLDFKQLLARYQGVNKSVIKTMSVMDFEK
VNLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHP
LHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGM
ESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLR
IKILEMFSTHSLQSVFARLIEPPHTDSLRASKIRLRDLGALTPDETLTPLGYHLASLPVD
VRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALL
RAYKGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFVKEGLRAREI
EKRAQGGGDGILDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVR
MQPKSDEVKFVTKSDGYVHIHPSSVNHQVRHFDSPYLVYHEKIKTSRVFIRDCSMVSVYP
LVLFGGGQVNVQLQKGEFIVSLDDGWIRFAAASHQVAELVKELRCELDQLLQDKIKNPSI
DLCTCPRGSRIISTIVKLVTTQ
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgctggaagaaagataccaggtctggatatctgcaaggagctggatatatggggtgaaa
atgagttcttcagtaagaaggaaaggcaagccagggaaaggaggtggaaaagggtcttcc
agaggaggaagaggaggcaggagccatgctagtaaatctcatgggggtggcagcagtggc
ggtggtgttggtggcaacagaaaggcatcaagtagaatctgggatgatggcgatgacttt
tgtatcttcagtgaatcaaggcattcatccagacctagtaacagtagcgtgagaaaaggg
gatggacgccccaaatggaagcccgaagccaaagtgcccctgcagactctacatatgact
tctgagaatcaggaaaaagtgaaagctcttctccgagacctgcaggaacaagatgcggat
gctggatctgaaggtgtttctggggaagaagaagatgatgagcctgattatgacgacgag
cagtactggtcacctggacgagaagcttcccttgttcctgactctgatcctttggaatgt
gctggctcaggcctggtggagcctcataacccagaatttacagtctcagcatttgcagtg
cacagactttccaggtatggtttccacactgaacactgtcaggcagcgctgaggatttgc
gatggagacgtgggggcatcactggaacgcctgctcacccagtgcttttcagagacattt
ggagagaggatgaagatatctgaggcagttgcgcacatgagcttggatgagtgtgtggaa
cagcgacaggaagaggcatttgctctcaagtcaatctgtggagaaaaatttatagaaaga
attcaaaacagagtctggaccattggattagaactggagtatttgacaagtaaattctgc
aaattcaagcaaaaggaaagtaccaaaaatacacaggaggcttcacttgaagtctgcaaa
ttttacctcaaaggaaattgtaaatttggatcaaagtgcaaatttaaacatgaagtgccc
ccaaatcaaattgtcggaagagtcgaaagaaatgtagatgattctcatctaaatgctaat
gaagatgcatcctttttatatgaacttgaaattcgattttctaaggaccacaaatacccc
taccaagctcctcttgtggcattttattccaccaatgagaatctacctctggcttgtcgt
ttacatatttctgagttcctttatggcaaagccttgacatttgcagaaacttcagaacct
gttgtatattctttgataaccctcttagaggaagaatcagaaataaccaagttactaaca
aatacccatcacaagtacagtgtccctcctgtgaactttctgccagtatcacctggaacc
agactaaataatcctgtctgtcgtaaaccagtgattccaagtaattcgtttttttcgaat
caaattccagaagttgaaaaagaatcagagcctgaggaggagacagatgaggatgaaggt
ccagcaccagttatggtggagaatgaaagctatgtcaaccttaagaaaaagatttccaaa
agatatgactggcaggcaaaatcagtacatgctgaaaatgtcaaaatctgcaagcagttc
cgaataaaacaggcctccagacagttccagtcagttctacaagaaagacagtcgctccct
gcttgggaagaaagagaaaacattctcaagctgttgagcaagcaccaagtgcttgttata
agtggtatgactggatgtgggaaaaccacacagattccacagtttattctggatgattct
ctgaatggaccccctgagaaggtggctaacatcatctgtacccaaccccgacgaatctct
gccatctctgttgctgaacgcgttgctaaagaaagggcagaaagagtgggtctgaccgtg
ggataccagatccggttagaaagtgtgaagtcctcagccaccagattgttatactgcacc
acaggagtgctgctaagaaggctggagggagacacagctctacagggagtcacccatatc
attgttgatgaagttcatgagaggacagaagaaagtgacttcttactgctagttttgaaa
gacattgtgttgcagagaccaactcttcaagttattctgatgagtgcaaccttaaacgct
gagctcttttcagaatattttaattcctgcccagttatcactataccaggtcgtacattt
cctgttgatcagttttttctggaagatgcaattgctgtgacaaggtatgtgttgcaggat
ggcagcccatacgcccgctccatgaaacagatgtcaaaggagaagctcaaggccaggcgc
agcagaaccgcatttgaggaggtggaggaggacctgcgcctctccctgcacctccagggt
caggattctgtcaaagatgcggtgccagatcaacagttagattttaaacagctccttgcc
cgctatcaaggagttaacaaatcagtcatcaaaacaatgtccgttatggattttgaaaag
gttaatcttgaattaatcgaggccttgttagagtggattgtggacggaaagcactcctac
cctccaggtgctatacttgtatttttaccgggactagcagaaatcaaaatgctatatgaa
cagctccagtctaattctcttttcaacaatagacgtagtaatcgatgtgttattcaccca
cttcattcgtctttatccagtgaagagcagcaggctgtgtttgtaaaacctcctatgggt
gtaactaagattataatttctaccaacattgctgagacatccataaccatcgatgatgtt
gtctatgtcatcgattctgggaaaatgaaagaaaagagatatgatgccagcaaagggatg
gaaagtttagaggatacttttgtctctcaagccaatgccctgcaaagaaaaggtcgagca
ggtcgtgtagcgtctggggtctgcttccatttattcaccagccatcacttcaatcaccaa
cttctaaagcagcagctaccagaaatacagagagtcccattggaacagctctgtctgaga
attaaaattttagagatgtttagcactcacagtctccagtctgtgttcgctcggctcatt
gaacccccgcacactgattctctccgtgcctcaaaaatacgattacgagacttgggagca
ttaactccagacgaaacactgacccctctcgggtatcacttggcctctttgcctgtagat
gtgagaatcggcaaactaatgctgtttgggtctatcttccgctgtttggatcctgctctc
accattgctgccagtttagcttttaagtctccttttgtatctccctgggataaaaaagag
gaagctaaccagaaaaagctagaatttgcatttgcaaacagtgattatctggcccttcta
cgagcatataagggatggcaactaagtatgaaagaaggtatgcgtgcaagttataattac
tgcagacaaaacttcctgtcaggaagagttcttcaggaaatggcaagcctgaaacgacag
ttcactgaactgttatcggacataggctttgttaaggagggactccgagcaagggaaatt
gagaaaagagcccaaggaggaggagatggtatattggatgccacaggagaagaggcaaac
tcaaatgctgagaaccccaagctgatatcagcaatgctgtgtgctgctctgtatccaaat
gtagtgcaggtgaaaagcccagaggggaaatttcagaagaccagtactggagctgtcaga
atgcagccgaaatcagatgaggtgaagtttgtcaccaagagtgatggatacgtgcacatt
cacccttcatcggtgaaccatcaggtcagacactttgacagtccctacctggtgtaccac
gagaagatcaaaactagtcgcgtgttcatccgagactgcagcatggtgtctgtgtaccca
ctggtcttgtttggaggaggccaagtgaatgtgcagctccaaaagggagagtttattgtt
tccttggatgatggttggatccgctttgcagctgcttcccatcaggtggcagaattagta
aaggaacttcgttgtgaacttgaccagctcctccaggataagataaaaaacccaagcata
gacctgtgcacctgtcctcgagggtcacggatcatcagcacgattgtgaaactcgtcacc
acacagtga
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integrated database retrieval system
