Bubalus bubalis (water buffalo): 102391221
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Entry
102391221 CDS
T05912
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04136
Autophagy - other
bbub04140
Autophagy - animal
bbub05010
Alzheimer disease
bbub05014
Amyotrophic lateral sclerosis
bbub05016
Huntington disease
bbub05017
Spinocerebellar ataxia
bbub05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102391221 (WIPI1)
04136 Autophagy - other
102391221 (WIPI1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102391221 (WIPI1)
05014 Amyotrophic lateral sclerosis
102391221 (WIPI1)
05016 Huntington disease
102391221 (WIPI1)
05017 Spinocerebellar ataxia
102391221 (WIPI1)
05022 Pathways of neurodegeneration - multiple diseases
102391221 (WIPI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102391221 (WIPI1)
03029 Mitochondrial biogenesis [BR:
bbub03029
]
102391221 (WIPI1)
Membrane trafficking [BR:
bbub04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
102391221 (WIPI1)
Mitochondrial biogenesis [BR:
bbub03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102391221 (WIPI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_NWD2_C
CNH
EIF3I
Beta-prop_IFT140_1st
DUF5711
Beta-prop_WDR19_2nd
Beta-prop_WDR35_TULP_N
BCAS3_WD40
DUF4934
Motif
Other DBs
NCBI-GeneID:
102391221
NCBI-ProteinID:
XP_006061959
LinkDB
All DBs
Position
3:complement(1617584..1648390)
Genome browser
AA seq
446 aa
AA seq
DB search
MEAEGADGAPGGAEAALSCFSFNQDCTSLAIGTKAGYKLFSLSSVEQLDHVHGSNDTPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSGNILSIRLNRQRLLVCLEES
IYIHNIKDMKLLKTILDIPANPTGLCALSINHSNSYVAYPGSLTTGEIVLYDGHSLKPVC
TIAAHEGTLAAIAFNSSGSRLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLAF
SMDSQFLCASSNTETVHIFKLEHLANSRPEEPSTWTGYMGKMFLAASSYLPTQVSDMMNQ
DRAFATGRLGFSGHRNICTLATIQKLPRLLVVSSSGHLYVYNLDPQDGGDCVLIKTHSLL
GSGTSEENKENDLRPPLPQSYAATVARPSASAASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPITSCRGDQQDKATPS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaaggcgcggacggcgccccgggcggggcggaggcagcgctcagctgcttc
tccttcaaccaggactgcacgtccctcgccatcggaaccaaggccggttacaagctgttc
tccctgagctccgtggaacagctggaccacgtccacggaagcaatgacacccccgacgtg
tacatcgtggagcgcctcttctccagcagcctggtggtggtggtgagccacacgaagccg
cgccagatgaatgtgtaccacttcaagaagggtacggagatctgcaactacagctactcc
ggcaacatcctgtccatcaggctgaaccggcagaggctgctggtctgcctggaggagtcc
atttacattcacaacatcaaggacatgaagcttctgaaaaccatcctggatattcccgca
aacccaacaggtctgtgcgcgctctccatcaaccattccaattcctacgtggcctacccc
gggagcctgaccacaggcgagatcgtgctctacgatggacactccctgaagcccgtctgc
accattgccgcccacgagggcacgctggccgccatcgccttcaactcctcgggctccagg
ctggccagcgcctcagagaagggcactgtcatccgggtattctccgttcctgacgggcag
aagctctatgagttccggagagggatgaaaaggtacgtgaccatcagctccctggctttc
agcatggactcgcagttcctctgtgcctccagcaacacggagaccgtgcacatcttcaag
ctggagcatctcgccaacagccgacccgaggagccctcaacctggaccggctacatgggg
aagatgttcctggccgcatccagctacctccccacccaggtgtctgacatgatgaaccaa
gacagggccttcgctaccgggcgtctgggcttctccggccacaggaacatctgcaccctc
gccacgatccagaagctgccgcggctcctggtcgtctcgtccagtgggcacctttacgtc
tacaacctggaccctcaggacggaggagactgtgtcctaatcaagacccacagcttgctc
ggctcaggaaccagcgaagagaataaagaaaacgacctcagaccgcccttacctcagtct
tacgccgcgacggtagccaggccgagcgcgtccgcagcctccaccgtgccgggttactcc
gaggacggcggggcgctccgcggggaggtcattcccgaacacgagtttgcaaccggaccg
gtttgtctggacgacgagaacgagttccctcctatcacttcgtgccgtggagatcagcag
gacaaagccacaccatcctga
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integrated database retrieval system
