Bubalus bubalis (water buffalo): 102391228
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Entry
102391228 CDS
T05912
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-2
KO
K16494
protocadherin beta
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbub04515
]
102391228
Cell adhesion molecules [BR:
bbub04515
]
Cadherins
Protocadherins
102391228
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
102391228
NCBI-ProteinID:
XP_006080983
LinkDB
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Position
9:complement(58927647..58930613)
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AA seq
771 aa
AA seq
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MKAGERMERFLKQRQVLTFLVLLGITQAGSEPRHYSVAEEMNSGSFVANLLKDLGLGVDD
LAAQAPGLFSNXKKKKKKRLHFERXTEDLLLNEKQDQEELCGLIEPCVLPFQILLDNPLQ
FFQAEIRIRGINDHSPVFLDKEIILKISESITPGTTFQIACALDLDVGINSFQXYTVSPN
SHFHLKLQVSSKGTILPQPGLDKALDREEQPEIRLTLPALDGGIPPKSGTAXLDMSDNAP
MFAQLHYEVQVLEHCPIGFQAAIISARDLDLGTSGEISYVFSQAPEDICRIFRINAKSGK
ILLIRELDFXSIQTYTLNIQATDGGGLSGSYVVPVQVMDLNDNPPELTISXFNEILENLR
ETIIAVFSVSDTDSGXNGRTACSIQEDLPFNLKPSVKNFYTXVTNAALDREARSKYNITI
TVTDMGTPRMKTEHNITVLASDFNDNAPAFTQTSYTLWFRENSPALHIGSVSATDTDAGA
NAQVTYSLLPPPDPLVPLASLVSINPDNGHLCALTSLDYEALRAFEFHVGATDRGSPALS
SQALVRVLVADANDNAPFVLYPLQNASAPCTELVPRAAEPGYLVTKVVAVDGDAGQNAWL
SYQLLKATEPGLFGVWAHNGEVRTARLLSERDAPKQRLVVLVKDNGEPRLVDGFSQPYLP
APEAEAAAAAPADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRGGAASAGRCPVPKAH
SPGHLVDVSGTGTLSNSYQYEVCLTGGWGLNEFKFLKPILASSLVQDTGQE
NT seq
2311 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaggagagagaatggagcgctttctgaaacaaaggcaagtcttgacattcctt
gttttgctgggcataactcaggctggttctgagcctaggcattattcagtggctgaggaa
atgaacagtggctcctttgtggccaatctattgaaagacctgggactgggggtagatgat
ctagctgctcaggccccagggttgttttcgaattgaaaaaaaaaaaaaaaaaagcgtttg
cattttgaaaggtaaaccgaggatttgttgttaaatgagaaacaggaccaggaggagctg
tgtggacttatcgaaccctgtgtactacctttccagatattactagacaatcccttgcag
tttttccaggctgagatacggattaggggcataaatgatcattccccagttttcctagat
aaagaaataattttgaaaatttcagaaagtatcactcccggaactacttttcagatagcg
tgtgccctggacttagatgtaggaatcaacagtttccaagttatacagtcagccccaatt
cccacttccatcttaaattacaagtcagttccaagggcacaatattaccacagccggggc
tggacaaagcactggatcgagaggaacagcctgagatcagattaacactcccagcactgg
atggcgggattccacccaagtctgggactgcggattagacatgagtgataatgcccccat
gtttgcacagctgcactatgaggtgcaagtcctggaacactgccccattggattccaggc
tgccatcatctctgccagagatttagatcttggaaccagtggagaaatatcttatgtatt
ttcgcaagcacctgaagatatctgcagaatatttcgaataaatgcaaaatccggaaaaat
ccttttaatacgggaactggatttctaatctatacagacctatactttaaatattcaggc
gacagatggtgggggcctttctggaagttatgtggtgcctgttcaagtgatggatttgaa
tgacaaccctccggaactgaccatatcttttcaatgaaatcctagaaaatttgcgggaga
ccataattgctgtattcagcgtttcagacactgactcgggacaacggaaggacggcttgc
tccatccaagaggatctccctttcaatcttaaaccctctgttaaaaacttttatacttga
gtcacaaacgcagccctggaccgagaagcaagatccaaatataacatcacaatcactgtc
actgacatgggaacccccaagaatgaaaaccgagcacaacataaccgtgctggcgtccga
cttcaatgacaacgcccccgccttcacccagacctcctacaccctctggttccgcgagaa
cagccccgccctgcacatcggcagcgtcagcgccacagacacagacgcgggcgccaatgc
ccaggtcacctactcgctgctgccgccccccgacccgctcgtgcccctcgcctccctcgt
gtccatcaaccccgacaatggccacctctgcgccctcacgtccctggactacgaggccct
gcgcgccttcgagttccacgtgggcgccaccgaccgcggctcgcccgctctcagcagcca
ggcgctggtgcgcgtgctcgtggcggacgccaacgacaacgcgcccttcgtgctctaccc
gctgcagaacgcctcggcgccctgcaccgagctggtgcccagggcggccgagccgggcta
cctggtgaccaaggtggtggcggtggacggcgacgcgggccagaacgcctggctgtcgta
ccagttgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaacggcgaggt
gcgcacggcgcggctgctgagcgagcgcgacgcgcccaagcagcggctggtggtgctggt
caaggacaacggcgagccgcggctggtggacggcttctcgcagccctacctgccggcccc
ggaagcggaagcggcggccgcggcgccggccgacccgctcaccgtctacctggtggtggc
cttggcgtcggtgtcgtcgctcttcctcttctcggtgctggtgttcgtggcggtgcggct
gtgcaggaggggcggggcggcctcggcgggtcgctgcccggtgcccaaggcccactcccc
aggccacctggtggacgtcagcggcacggggaccctgtccaacagctaccagtacgaggt
gtgcttgacgggaggctgggggttaaatgagtttaaattcttgaaaccgattcttgctag
tagtctggttcaagacactgggcaggagtag
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