Bubalus bubalis (water buffalo): 102391279
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Entry
102391279 CDS
T05912
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04151
PI3K-Akt signaling pathway
bbub04510
Focal adhesion
bbub04512
ECM-receptor interaction
bbub04518
Integrin signaling
bbub04820
Cytoskeleton in muscle cells
bbub04974
Protein digestion and absorption
bbub05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102391279 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102391279 (COL9A1)
04518 Integrin signaling
102391279 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102391279 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102391279 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102391279 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102391279 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bbub00535
]
102391279 (COL9A1)
Proteoglycans [BR:
bbub00535
]
Extracellular matrix (ECM) proteoglycans
Others
102391279 (COL9A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
DUF4882
Motif
Other DBs
NCBI-GeneID:
102391279
NCBI-ProteinID:
XP_044780505
LinkDB
All DBs
Position
10:94697469..94787917
Genome browser
AA seq
1004 aa
AA seq
DB search
MRKRMSQRCGETGLQQFAGGHLTEVCQNKRRFRTRKIPVLFFVCSFLGTWASVTVKRRPR
FPVNSNSNGENELCPKVRIGQDDLPGFDLISQFQIDKAASRKAIQRVVGSTALQVAYKLG
NNVDFRIPTRHLYPNGLPEEYSFLTTFRMTGSTLEKHWSIWQIQDSSGKEQVGVKINGQT
KSVSFSYKGLDGSLQTAAFSNLPSLFDSQWHKIMIGVERSSATLFVDCNRIESLPIKPRG
PIDVDGFAVLGKLVDNPQVSVPFELQWMLIHCDPLRPRRETCNELPARITTGGTHASWAG
APSHPRLPGALLAGTSATARSAGMAWAASRHGALGLRLLLSGLCLCAAQRGPPGEQGPPG
PPGPPGVPGIDGIDGDRGPKGPPGPPGPPGEPGKPGAPGKPGTPGADGLTGPDGSPGSVG
PRGQKGEPGVPGPRGFPGRGIPGPPGPPGGAGLPGELGRVGPIGDPGKRGPPGPPGPPGP
SGTIGFHDGDPLCPNSCPPGRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGE
VGAQGPPGAQGLRGITGVAGEKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEIGPKGD
RGPQGSPGIPGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGEAGLQGLPGIPGL
PGAKGVAGEKGNTGAPGKPGQLGNSGKPGRQGPPGEVGPRGPRGLSGSRGEVGPVGPPGP
PGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGL
PGPKGSVGNPGEPGVRGPEGSRGLPGEEGPRGPPGPRGVQGEQGATGLPGIQGPPGRAPT
DQHIKQVCMRVIQEHFAQMAASLKRPDSGASGLPGQPGPPGPPGPPGENGFPGQMGLRGL
PGMKGPPGALGVRGPKGDAGERGDRGPPGRGPKGLPGAPGLPGDPGPASYGRNGRDGERG
PPGAAGIPGVPGPPGPPGPPGFCEPASCTMQAGQRAFNSKGPNQ
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacggatgtcccagcgctgtggggagacaggactccaacagtttgctggagga
catctaactgaagtgtgtcagaacaaacggagattcagaacaaggaaaattccggttctc
ttctttgtatgcagtttcctggggacctgggcatcagtgactgtcaagcgtcgcccaagg
ttccctgttaattcaaattccaatggtgaaaatgaactctgtccaaaggtcaggattgga
caagatgatttaccaggatttgacttgatttctcagttccagatagataaagcagcatcc
agaaaggctatccagagggtagttggatcaactgccttacaggtggcttacaagttggga
aataatgtagacttcaggattccaaccaggcatttatatcccaatgggctgcctgaagaa
tactcctttctaaccacttttcggatgactggaagcacacttgaaaagcactggagcatt
tggcagattcaggattcctcagggaaggagcaagttggcgtgaagattaatggccaaaca
aaatctgtttcattttcatacaaggggctggatggaagtctccaaactgcagccttttcg
aatttgccctccttgttcgattcccagtggcataagatcatgattggcgtggaaaggagc
agtgcgactcttttcgttgactgcaacaggattgagtccttacctataaagccaagaggt
ccaatcgatgtcgatggctttgctgtgctgggaaaacttgtggataatcctcaagtttct
gttccgtttgaacttcaatggatgctgatccattgtgaccccctgagacccaggagagaa
acttgcaatgagctgccagccaggatcacgacaggaggaactcacgcctcctgggccggc
gccccctcgcatccccggctcccgggggcgctcttggcggggacaagcgccactgcgcgc
tcggcgggcatggcttgggcggcgtcgcgccacggggccctcgggctacgactgctgctg
tcggggctctgcttgtgcgcggctcaaaggggccccccaggtgagcagggtcctccgggg
ccgccgggtccccctggagtcccgggcatcgacggcatcgacggtgatcgcggtccgaag
ggtcctccgggccccccgggtccccctggagagccggggaaaccaggagctccaggcaag
cctggcacaccgggtgccgacggattaacaggtcctgatggatcccccggctctgttgga
ccaagaggacaaaaaggagaacctggtgtgccaggacctcgtggatttccaggccgtggt
attcctggacctcctggtcctcctgggggagcaggactccctggagagcttggccgtgtg
ggaccgattggcgaccctgggaaaagaggaccacctggcccccctggccccccgggaccc
agtggaacaattggctttcatgatggagatccattgtgtcccaattcctgcccaccgggt
cgttcgggatacccaggtctgccaggcatgaggggtcataaaggagctaaaggagagatt
ggtgaacctggaagacaaggtcacaagggtgaagaaggggaccagggtgaactgggagaa
gttggagctcaaggacctccgggagctcaaggtttgagaggcatcaccggcgtagctggc
gagaaaggggaaaagggtgctcggggtttagatggagaacctgggcctcaagggctccct
ggtgcacctggtgaccaaggacagcgaggacctccaggagaaataggtcccaagggagac
agagggccacaaggttctccaggaattcctggtctccctgggcccaaaggggacacgggc
ttgccaggtgtggatggccgtgacgggatacctggaatgccgggaacaaagggggaacca
gggaaacccgggcctcctggtgaagcaggtttgcaggggttacctggtatacctggactt
cctggtgcaaagggtgttgctggtgaaaagggtaacacaggtgctccagggaagcccggt
caattggggaattctggcaaaccgggccgccaggggccgcccggagaagtgggaccccga
ggaccccggggcctttctggcagcagaggtgaagtaggaccagtgggacccccagggcca
ccgggtaaactgggttctcttggcagccccggcctccctggcttgcctggcccccctgga
cttcctgggatgaaaggtgacaggggtgtagttggtgaacctggtccaaagggtgaacag
ggtgcctctggtgaagagggtgaagctggagaaaggggtgaactcggagatataggatta
cctggcccaaagggatctgtggggaaccctggggagcctggcgtgagggggcccgaaggc
agccgggggcttcccggagaggaaggaccccgaggcccgcccggcccgcgcggcgtgcag
ggggagcagggcgccaccggcctgcccgggatccagggccccccgggcagagcaccgact
gatcagcacatcaagcaggtttgcatgagagtcatacaagagcactttgctcagatggcc
gcgagtctcaagcgtccggactccggagcctcgggcctccctggacagcctggaccccct
ggacccccgggcccccctggagagaatggctttccgggccagatgggactccgcggcctc
ccgggcatgaagggtccccctggcgctctcggtgtgaggggccctaaaggtgatgcagga
gaaagaggggatcgtggccccccaggaagaggtcccaaaggtttgccaggagctccgggt
ctcccaggtgacccgggtcctgccagctacgggaggaatggccgagacggcgagcgaggc
ccccccggggcggcaggcatccccggtgtgcccggccccccaggccccccgggtccccct
ggtttctgcgagccagcgtcctgcaccatgcaggccggtcagcgggcattcaacagcaaa
ggtcccaatcagtga
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