Bubalus bubalis (water buffalo): 102391778
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Entry
102391778 CDS
T05912
Symbol
LTA
Name
(RefSeq) lymphotoxin-alpha
KO
K05468
lymphotoxin alpha (TNF superfamily, member 1)
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04060
Cytokine-cytokine receptor interaction
bbub04061
Viral protein interaction with cytokine and cytokine receptor
bbub04064
NF-kappa B signaling pathway
bbub04668
TNF signaling pathway
bbub04940
Type I diabetes mellitus
bbub05166
Human T-cell leukemia virus 1 infection
bbub05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
102391778 (LTA)
04668 TNF signaling pathway
102391778 (LTA)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
102391778 (LTA)
04061 Viral protein interaction with cytokine and cytokine receptor
102391778 (LTA)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
102391778 (LTA)
05168 Herpes simplex virus 1 infection
102391778 (LTA)
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
102391778 (LTA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
bbub04052
]
102391778 (LTA)
Cytokines and neuropeptides [BR:
bbub04052
]
Cytokines
Tumor necrosis fators
102391778 (LTA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
102391778
NCBI-ProteinID:
XP_044784464
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Position
2:24715671..24719005
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AA seq
204 aa
AA seq
DB search
MTPPGRLYLLRVCSTPPLLLLGLLLALPPEAQGLRGVGLTPSAAQPAHQQLPKPFTRGTL
KPAAHLVGDPSTQDSLRWRANTDRAFLRHGFSLSNNSLLVPTSGLYFVYSQVVFSGRGCF
PRATPTPLYLAHEVQLFSPQYPFHVPLLSAQKSVCPGPQGPWVRSVYQGAVFLLTRGDQL
STHTDGISHLLLSPSSVFFGAFAL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgacaccacctggacgtctctacctcctgagggtgtgcagcaccccacccctcctcctc
ctggggctgctgctggccctgccgccggaggcccaggggctccgtggtgttggcctcaca
ccctcagctgcacagcctgcccatcagcaactcccgaagcccttcacccgtggcaccctc
aaacccgccgctcaccttgttggagaccccagcacccaggactcgctgcgctggagggca
aacacggaccgcgccttcctccgccacggcttctctctgagcaacaactccctcctggtc
cccaccagtggcctgtacttcgtctactcccaagtggtcttctccgggagaggctgcttc
cccagggccacccccacccctctctacctggcccatgaggtccagctgttttccccccag
taccccttccacgtgcctctcctcagtgctcagaagtccgtgtgcccagggccacagggg
ccgtgggtgcgctcggtgtaccagggggctgtattcctgctcacccggggagaccagcta
tccactcacacagacggcatctcccacctgctcctcagccccagtagtgtcttctttgga
gccttcgctctgtag
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