Bubalus bubalis (water buffalo): 102392116
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Entry
102392116 CDS
T05912
Symbol
VTI1A
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X3
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
102392116 (VTI1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102392116 (VTI1A)
Membrane trafficking [BR:
bbub04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
102392116 (VTI1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Laminin_II
DUF6987
Mer2
DUF1664
Adhesin_P1_C
DUF5339
FapA
HAAS
DUF5344
Motif
Other DBs
NCBI-GeneID:
102392116
NCBI-ProteinID:
XP_044791177
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Position
23:32974987..33358899
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AA seq
277 aa
AA seq
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MSSDFEGYEQDFAVLTAEITNKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVR
EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDDGNSSENQLIKLRE
ERAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDAN
LGKSSRVLTGMLRRGAVNCMGRKTHGSTLPPGQEAVPTRGTEPLATPLPEQQVILRVGCM
DRLSPSPPSNLVTKTLLRLPRKPSNFTRLASFGCTAQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgactttgaaggctacgagcaggacttcgcggtgctcacggcagagatcacc
aacaagattgcaagggtcccccgactcccacctgatgagaagaagcagatggttgcaaac
gtggagaagcagctcgaagaagcaaaagaactgctggaacagatggatttggaagtccga
gagatacctccccaaagtcgaggaatgtacagcaacaggatgagaagctacaagcaagag
atgggaaaactcgaaacagatttcaaaaggtcacggatcgcctacagtgacgaagtacgg
aatgagctcctaggggatgatgggaattcctcagagaaccagttgataaaattacgtgaa
gagagggcacatctgctcgataacacagagaggctggaaaggtcatctcggagactagag
gctggataccaaatagcagtggaaaccgaacaaattggccaggagatgttggaaaacctc
agtcatgacagagaaaagatacagagagcacgtgaaaggcttcgggaaacagatgctaac
ttggggaaaagctccagggttctgacagggatgttgcgaaggggcgctgtgaattgtatg
ggcaggaagacacatggatccaccctccccccgggacaggaggcagtgccaacaaggggc
accgagccactggccacgcccctcccagagcagcaggtgattctcagagttggttgcatg
gaccgcctgtctccttcccccccatctaatctggtcaccaagacactcctccgtcttccg
aggaagccgagcaacttcacaagactcgcctcgtttggatgcacagcacaatga
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