Bubalus bubalis (water buffalo): 102392118
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Entry
102392118 CDS
T05912
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbub03009
]
102392118 (DDX52)
Enzymes [BR:
bbub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102392118 (DDX52)
Ribosome biogenesis [BR:
bbub03009
]
Eukaryotic type
90S particles
Helicases
102392118 (DDX52)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Cas3-like_C_2
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
102392118
NCBI-ProteinID:
XP_006065562
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All DBs
Position
3:49293000..49316701
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AA seq
599 aa
AA seq
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MDAHDLFRRLGVGAKFDLRRFSADAARFQIGKRKYDFDSSEVLQGLDFFGNKKPVPGDRG
ALRTHQELQDEEKKEESQIERKKEQNRKKKKKKMTSEITSEEEFSTIQWVSSVEAKIEDK
NVKRENKLTSGKLEQLRKEKLNFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQN
IVDAGFQTPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMHLKQPTNKGFRALI
ISPTRELASQIHRELVKLSEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYL
LKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYD
VEQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFV
QSIERAKELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFK
GVNLVINYDFPTSSVEYIHRIGRTGRAGHKGKAITFFTEDDKPLLRSVANVIQQAGCPVP
EYIKGFQKLLSKQKKKMIKKPLERESISTTPKYFLEKAKDKRKKVTGQNKEKVAPEDKS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcacgatctgtttcgccggctcggcgtgggggccaaattcgacttgagacgc
ttttcagcggacgcagctcgattccagataggaaaaaggaaatatgactttgattcctcg
gaggtgctacagggattggacttttttggaaacaaaaagcctgtcccaggtgatcgtggg
gcattaagaactcatcaggagctacaagatgaagagaaaaaagaagaaagccaaattgaa
aggaagaaggagcagaacaggaaaaagaagaagaagaagatgacttcagaaattacttct
gaagaagaattttctactatacagtgggtatcatctgtggaagcaaagattgaagataaa
aatgttaaaagagaaaataaactaacttcaggaaagttagagcagctaagaaaagaaaag
ctaaacttcttccggaataaacataaaattcatgtccaaggaactgatcttcctgaccca
attgctacgtttcagcaacttgaccaggaatataaaatcaattctcgactgcttcagaac
attgtagatgcaggcttccagacacctacaccaatccaaatgcaagccattccagttatg
ctgcatggtcgagaactgctggcttctgctcctactggatctggaaagactttggctttt
agcattcctattttaatgcacctgaaacaacccacaaataaaggcttcagagccttgatt
atatcacctacacgagaacttgccagccagattcaccgagagttagtaaaactgtctgag
ggaacaggattcaggatacacatgatccacaaagcagcagttgcagccaagaaatttgga
cctaaatcatctaagaaatttgatatccttgtgactactccaaatcgactaatctattta
ttaaaacaagatcctccaggaatagacctaacgagtgttgaatggctggtagtagatgaa
tcagataaactgtttgaagatggcaaaactgggttcagagaccagctggcttccattttc
ttggcctgtacatcccacaaggtgaagagagctatgttcagtgcaacttttgcctatgat
gttgaacagtggtgcaaactgaacttggacaatgtcattactgtatccattggagcaagg
aattctgcagtagagacggtagaacaagagcttctctttgttggttcggagactggaaaa
ctactggccatgagagaacttgttaaaaagggtttcaatccacctgttcttgtttttgtt
cagtccattgaaagggctaaagaactttttcatgagctcatatatgaaggtattaacgtg
gatgttattcatgcagacagaacacagcaacagagagataacacagtccacagcttcaga
gcaggaaaaatctgggttcttatttgtacagccttgctagccagagggatcgattttaaa
ggtgtgaacttggttatcaactatgactttccaaccagctcagtggaatatattcacagg
ataggtcgaactggaagagctgggcataaaggaaaagctattacatttttcactgaagat
gataaaccattattaagaagtgttgccaatgttatccagcaggctggatgtcctgtccca
gaatacataaaaggtttccagaaactactaagtaaacaaaagaaaaagatgattaagaag
cccttggaaagggagagcattagtacaactccaaaatattttttagaaaaagcaaaggat
aaacggaaaaaggtcactggtcagaacaaggagaaagtagctcctgaggacaaaagttaa
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