KEGG   Bubalus bubalis (water buffalo): 102392119
Entry
102392119         CDS       T05912                                 
Symbol
WDR61
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102392119 (WDR61)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbub03019]
    102392119 (WDR61)
Messenger RNA biogenesis [BR:bbub03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     102392119 (WDR61)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_MABP1-WDR62_2nd WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_WDR19_1st eIF2A Beta-prop_Vps41 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_EIPR1 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_HPS5 Ge1_WD40 Cytochrom_D1 PROPPIN Beta-prop_WDR75_2nd Beta-prop_DCAF12 WD_LRWD1 VPS8_N WDR54 Beta-prop_VPS8 Beta-prop_RIG_1st WD40_like GSDH Nucleoporin_N DUF2415 Beta-prop_IFT122_2nd Vgb_lyase
Other DBs
NCBI-GeneID: 102392119
NCBI-ProteinID: XP_006044443
LinkDB
Position
20:39580827..39600004
AA seq 305 aa
MTNQYSILFKQEQAHDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSL
EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQY
LATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF
CPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHI
YDCPI
NT seq 918 nt   +upstreamnt  +downstreamnt
atgaccaaccagtacagtattctcttcaaacaagagcaagcccatgatgatgccatctgg
tcagttgcctgggggtcaaacaagaaagaaaactctgagacagtggtcacgggatccctg
gatgacctggtgaaagtctggaaatggcgtgatgagaagctggacctacagtggagtctg
gagggccatcagctgggtgtggtgtctgtggacatcagccacaccctgcccattgctgca
tccagttctcttgatgctcatattcgtctctgggacttggaaaacggcaaacagataaag
tctatagatgcaggacctgtggatgcctggactttggccttttctcctgattctcagtat
ctggccacaggaactcacgtgggaaaagtgaacatttttggtgtggaaagtgggaaaaag
gagtattctttggacacaagaggaaaattcattcttagtattgcatatagtcctgatggg
aaatacctggccagtggagccatagacggaatcatcaatatttttgatattgcaactggg
aaacttctgcatacgctggaaggccatgctatgcccattcgatccttgactttttccccg
gattcacagctccttgtcactgcttcagatgatggctacatcaagatctatgatgtacaa
catgccaacttggctggcacattgagtggccacgcatcctgggtgctgaatgttgcattt
tgtcctgatgacacacactttgtttccagttcatctgacaaaagtgttaaagtttgggat
gttggaacgaggacttgtgttcacaccttctttgatcaccaggatcaggtctggggagta
aaatacaatggaaatggctcaaaaattgtgtctgttggagatgaccaggaaattcacatc
tatgattgtcccatttaa

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