Bubalus bubalis (water buffalo): 102392465
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Entry
102392465 CDS
T05912
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X9
KO
K06238
collagen type VI alpha
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04151
PI3K-Akt signaling pathway
bbub04510
Focal adhesion
bbub04512
ECM-receptor interaction
bbub04820
Cytoskeleton in muscle cells
bbub04974
Protein digestion and absorption
bbub05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102392465 (COL6A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102392465 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102392465 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102392465 (COL6A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102392465 (COL6A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102392465 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbub04147
]
102392465 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
bbub00536
]
102392465 (COL6A3)
Exosome [BR:
bbub04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102392465 (COL6A3)
Glycosaminoglycan binding proteins [BR:
bbub00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102392465 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
102392465 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
fn3
HC2
Motif
Other DBs
NCBI-GeneID:
102392465
NCBI-ProteinID:
XP_044801280
LinkDB
All DBs
Position
6:complement(116410139..116500279)
Genome browser
AA seq
2426 aa
AA seq
DB search
MRRHRHVPLVAVLCLFFSGFSFTRGQQEPESKRDILFLFDGSANLMGQFTAARDFLYKVI
DELDVKPDGTRVAVAQYSDDVKVESRFDQHQNKPEILNLVKRMKLKTGKALNLGYALDYA
QRYIFVKSAGSRIEDGVLQFLVLLVAGKSSDRVDTPALNLKQSGVVPFILQAKNADPAEL
ELIVPSPAFILVAESLPKIGDLQPQIVNLLKSVQNGAPAPVSVEKDVVFLIDGSEGVGSG
FPLLKEFVQRVVGSLDVGPDRVRVAVVQYSDRTRPEFYLNSYMDQQSVLGAIRGLTLLGG
PAPNTGAALEFVLRNILVGSAGSRIAEGVPQLLIVLTADRSGDDVRGPSVVLRRGGAVPI
GIGIGNADITEMQTISFIPDFAVVVPTFRQLGTIQQVISDRVTQLSREELSRLQASVTPL
TTPVVSGKRDVVFLIDGSQSAGPEFQYIRTLIERLVDYLDVGFDTTRVAVIQFSDDPRVE
FLLNVHSSKDEVQNAVRRLRPKGGRQVNVGGALEYVARNIFKRPLGSRIEEGVPQFLVLI
SSGKSDDEVEDSAIELKQFGVAPLTIARNVDQEELVKISLSPEYVFSVNTFRELPSLEQK
LLTPLTTLTAGQIQQLLASTRYPPPAVESDAADVVFLIDSSDGVKPDGIAHIRDFVIRIV
RRLNVGPNKVRIGVLQFSNDVFPEFQLKTYKSQASVLDAIRRLRFKGGSPLNTGKALEFV
ARNYFVKSAGSRIEDGVPQHLVLFLGGKSQDDISRYSQVIKSAGIASLGVGDRNIDRTEL
QTITSDPRLVFTVREFRDLPNIEERIVNSFGSSGVTPAPPGVDTPSPSRPEKKKADIVFL
LDGSINFRRDSFQEVLRFVSEIVDTVYEGGDSIQVGLVQYNSDPTDEFFLKDFPTKQQII
DAINKVVYKGGRHANTKVGLEHLRRNHFVPEAGSRLDQRVPQIAFVITGGKSVEDAQEAS
MALTQRGIKVFAVGVRNIDSEEVGKIASNSATAFRVGNVQELSELSEQVLETLHDAMHET
LCPGVTDVSKACNLDVILGFDGSRDQNVFVAQKGLEPKVDTILRRISQMQKISCSGSQLP
TVRVSVVALTPSGPVEAFDFAEYQPELFEKFQNMRAQHPYVLTADTLKLYQNKFRQASMD
NVKVVIHFTDGVDGDLADLQRASEELRQEGVRALILVGLERVANLEQLMQLEFGRGFTYN
RPLRLNLLDLDYELAEQLDNIAEKACCGIPCKCSGQRGDRGPIGSIGPKGIPGEDGYRGY
PGDEGGPGERGPPGVNGTQGFQGCPGQRGVKGSRGFPGEKGELGEIGLDGLDGEDGDKGL
PGTSGEKGSPGRRGDKGPKGDKGERGDVGIRGDPGNSGQDSQQRGAKGETGDIGPVGLPG
RDGVSGGPGEPGKSGGFGRRGPAGAKGNQGGPGQQGPVGEQGTRGAQGPPGPTGPPGLIG
EQGIPGPRGSGGTAGAPGERGRTGPLGRKGEPGDPGPKGSIGNRGPRGETGDDGRDGVGS
EGRRGKKGERGFPGYPGPKGNPGEPGTDGPLGPKGIRGRRGNSGPPGIAGQKGDPGYPGP
SGYKGSRGDSMDQCALVQSIKDKCPCCYGPLECPVFPTELAFALDTSEGVTQDTFSRMRE
VVLKILDDLTIAESNCPRGARVAVVSYNNEVTTEIRFADSKKKSVLLDKIKNLQVSLTSK
QQSLETAMSFVARNTFKRVRSGFLMRKVAVFFSNKPTRATPQLREAVLKLSDAGITPLFL
TSQEDRQLINALQINNTAVGHALVLPAGGDLTDFLKNVLTCHVCLDICNIDPSCGFGSWR
PSFRDRRAAGSDVDIDMAFILDSSESTTPFQFNEMRKYIEYLVRQLDVSPDPKASQHFAR
VAVVQHAPYEAVDNASVPPVRVEFSLTNYGSKEKLLAFLGSRMTQLQGTRALGRAIDYTI
ENIFESAPNPRDLKIVVLMLTGEVQKQQLEEAQRAILQAKCKGYFFVILGIGRKVNVKEL
YSSASEPNDVFFKLVDKSTELNEEPLMRFGRLLPSFVSSKDAFYLSPDIRKQCDWFQADQ
PAKNLVQFGYKQINVPNNVTSSPTSKLVTTTKPVITTTKPVTVVNLPASKPAATRPVDER
PAAGRSVATKTDSARPVATKTEATKTEAAKSVVTKAEAAKPTATKTEATKTEAAKLMATK
TEATKSVASRPEAVKTDTARPAAAAKPAAAKPAPARPPTAARSMATRSEAPRPQAAKLAA
SRPGTAKPVVKAPREIHVSEVTENSARLHWERPEPPSPYVYNLTVTSAHDQAVVLKQNLT
VTARVVGGLLPGQTYHVTVTCSLRSQVRAVYQGSFSTKKIQPPPPQTERSASSATINLVV
SADRLAGSKAGEPLKILDICKLPKDGGTCREFVLKWYYDSVTENCARFWYGGCGGNENRF
NSQDECEKVCPPVPIKQPGVIAAMGT
NT seq
7281 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggcatcggcatgtgcccttagtggccgttctctgcctctttttctcaggcttc
tccttcactcgtggtcaacaagagccagagagcaagcgagacatcctgttccttttcgac
ggctcagccaacctcatgggccagttcactgctgcccgtgactttctctacaaggtcatc
gacgagctggacgtgaaacctgacgggacccgggttgcggtggctcagtacagcgatgat
gtcaaggtggagtcccgttttgaccagcaccagaataagcctgagatcttgaatctcgtg
aagaggatgaagctcaagacgggcaaagccctcaacctgggctacgccttggactatgca
cagaggtacatctttgtgaagtccgctggaagccggattgaggatggagtgcttcagttc
ctggtgctgctggtggcgggaaagtcatcggaccgggtggatacgcccgcactcaacctg
aagcagagcggggtggtgcccttcatcctccaggcgaaaaacgcggaccctgctgagttg
gagctgatcgtaccatccccagcctttattctggttgcggagtcccttcctaagattgga
gacctgcaaccacagattgtgaacctcttaaaatcagtgcaaaatggggcaccggcacca
gtttcagttgaaaaggatgtggtgttcctgattgatggctccgagggtgtcgggagcggc
ttcccactgctgaaggagttcgtccagagagtggtggggagcctggacgtggggccagac
cgggtgcgcgtggctgtggtgcagtacagcgaccggaccagacccgagttctacctgaat
tcctacatggaccagcagagtgtgcttggagccatccgcgggctgaccctgctgggcggg
ccggcccccaacacgggggccgccctggagttcgtcctgaggaacatcctggtgggctcc
gctgggagccgcatagcagaaggcgtcccccagctcctgattgtcctcacggccgacagg
tctggggatgacgtgaggggcccctctgtggtcctgaggaggggaggggccgtgcccatt
ggcatcggcattgggaacgctgacatcaccgagatgcagaccatctccttcatcccggac
ttcgccgtggtcgtccccaccttccggcagctggggaccatccaacaggtcatctcggat
agagtgacccagctcagccgcgaggagctgagcaggctgcaggcgtctgtcacccccttg
acgactccggtggtcagcggcaagagggacgtggtctttctcatcgatgggtcccagagt
gctggccccgagttccagtacatccgaacgctcatcgagaggctggtcgactacctggat
gtgggcttcgacacgacccgggtggcggtcatccagttcagcgatgaccccagggtggag
ttcctgttgaacgtccactccagcaaggacgaggtgcagaacgccgtgcggcggctgcgg
cccaaaggcgggaggcaggtcaacgttgggggtgccctggagtacgtggcaaggaacatc
ttcaagaggcccctggggagccggattgaggagggtgtccctcagttcctggtcctcatt
tcctccgggaagtcggatgatgaggtggaggactcggccatagagctcaagcagtttggc
gtggcgccactcacgatcgccaggaacgtggaccaggaagagctggtgaagatctcgctg
agccccgagtacgtgttctcagtgaacaccttccgggagctccccagcctggagcagaaa
ctgctgacaccgctcaccaccctgactgctgggcagatacagcagctcctggccagcacg
cgctacccgcctccagctgtggagagcgatgctgcggacgttgtcttcctcatcgacagc
tctgatggagtgaagccagatggcatcgcgcacatccgggactttgttatcagaatcgtg
cggagactcaatgtcggtcccaacaaagtgagaattggggtcctgcagttcagcaatgac
gtcttcccagaatttcaactaaagacctataaatcccaggccagcgtgctggatgccata
cgtcgcctgaggttcaaaggggggtctcctctcaacactggcaaggctctggaattcgtg
gcaaggaattactttgtcaagtctgccgggagccggatagaagatggggtgccccaacac
ctggttctatttctgggtggaaaatcccaggatgatatttccaggtattcccaggtgata
aaatctgcaggaattgcgagcttaggggttggagaccgaaatattgacagaacagagctg
cagaccatcaccagcgatcccaggctcgtcttcacggtgcgggagttcagagacctcccc
aacatagaagaaaggatcgtgaattcctttgggtcctccggggtcacccctgcacctccg
ggagtggacacaccctctccttcaaggccagagaagaagaaagctgacattgtgttcctg
ctggatggttccatcaatttccggagagacagtttccaggaagtgctccgttttgtgtca
gaaattgtggacacggtttatgaagggggcgactccatccaggtggggctagtccaatac
aactctgaccccactgacgagttcttcctgaaggacttccccaccaagcagcagattatc
gacgccataaacaaggtggtctacaaaggggggaggcacgcgaacaccaaggtgggcctg
gagcacttgcggcggaaccactttgtgcccgaggcaggcagccgcctggaccagagggtc
ccgcagatcgcctttgtgatcacggggggcaagtcggtggaggacgctcaggaggcgagc
atggcactcacgcagagaggcatcaaggtgtttgcggtgggcgtaaggaacatcgactcg
gaggaggttgggaagatagcgtccaacagcgccacggccttccgggtggggaacgtccag
gagctgtcggaactgagcgagcaggttttggaaaccctgcatgatgcgatgcatgagacc
ttatgtccaggcgtgactgacgtttccaaagcctgtaacttggatgtgattctgggcttc
gatggttcaagagatcagaatgtctttgtggctcagaagggcctcgagcccaaggtggac
accatcctgaggagaatcagtcagatgcagaagatcagctgcagcggcagccagctgccc
acggtgcgggtgtctgtggtggccctcacgccctcaggccccgtcgaggcctttgacttt
gctgagtaccagccggagctgtttgagaagttccagaacatgcgtgcccagcacccctac
gtcctcaccgcggacacactgaagctctaccagaacaagttccggcaggcctcgatggac
aacgtgaaggtggtcattcattttaccgatggagtggatggggatctggctgatttacaa
agagcatcagaggagctccgacaagaaggtgtccgagctctgatcttggtgggcctcgaa
cgtgtcgccaacttggagcagctcatgcagctggagttcgggcgaggattcacgtacaac
cggcccctgaggctgaacttgctggacctcgactacgaactagctgagcagcttgacaac
attgctgagaaagcctgctgtgggattccctgcaaatgctctggacaaagaggagaccga
gggcccataggcagcatcgggccaaagggcattcctggagaagatggctaccgaggttat
cctggtgacgaaggtggacctggtgagcgcggtcctcctggcgtgaacggcactcaaggt
ttccagggctgccccgggcagagaggagtcaagggctctcgtggattcccgggagagaag
ggtgaattaggagaaattggactggatggtcttgatggtgaagatggcgacaaagggctg
cccggtacttctggagagaaagggagtccaggaaggaggggtgacaaaggacccaaaggc
gacaaaggggagagaggtgatgtcgggatcagaggtgacccgggcaattcaggacaggac
agccagcagagaggagccaaaggagaaaccggagacatcggccccgtgggtctccctggg
agagatggggtgtctggagggcctggagaacccgggaagagcggtggctttggccgaagg
ggaccagcaggagctaagggcaaccagggcggccccggccagcagggccctgtgggagag
caggggaccagaggcgcgcagggtccgcctggtcccaccggtcctccaggcctgattggt
gaacagggcattcccggacctcggggaagcgggggaactgcaggtgctcctggagaacgc
ggcagaaccgggcctctgggaagaaagggtgagcccggagatccaggacctaaggggagc
atcgggaaccggggtcctcgtggggagacgggagatgatgggcgagatggagttggcagt
gaaggacgcagaggcaagaaaggagaaagaggattccctggatacccaggtccaaagggc
aatcctggtgagccagggacagacggaccactgggacccaaaggcatcagaggccgaagg
ggaaactcgggacctccagggatagctggacagaagggagaccccggttacccagggcca
tctggttacaaaggcagcagaggcgactcaatggaccaatgtgcgctggtccagagcatc
aaagataaatgcccttgctgttacgggcccttggagtgccccgtcttcccgacggagctg
gcttttgccttggacacctccgagggggtcacccaggacactttcagccggatgagggag
gtggtcctcaagattctggacgacctgaccatcgccgagagcaactgcccacggggggcc
cgcgtggctgtggtcagctacaacaacgaggtcaccacggagatccgctttgctgactcc
aagaagaagtctgtcctcctggacaagatcaagaacctgcaggtgtcgctgacctccaag
cagcagagcctggaaaccgccatgtcctttgtggccagaaacacgtttaagcgggtgcgg
agcgggttcctgatgaggaaggtggcggtgttcttcagcaataagcccacgagggcgacc
ccgcagctccgggaggctgtgctcaagctctcagatgctgggatcacacccttgttcctc
acgagccaggaggaccggcagctgatcaatgccctacagatcaataacacagcggtggga
catgcccttgtccttcctgctggcggagacctcacagacttcttgaagaatgtcctgact
tgtcacgtctgcttggacatctgcaacattgacccatcctgtggattcggcagctggagg
ccttccttcagggacaggagggcagcaggcagtgacgtggacatcgacatggctttcatc
ttagatagctccgagtccaccaccccgttccagttcaacgagatgaggaagtacatcgag
tacctggtccgacagctggacgtgagcccggaccccaaggcctcccagcactttgcccgc
gtggcggtggtgcagcacgcgccctacgaggcggtggacaacgccagcgtgccacccgtg
agggtggagttctccctgaccaactatggctccaaagagaagctgctggcctttcttggc
agcaggatgacccagctgcaggggaccagggctttgggccgcgccatcgactacaccatt
gagaacatcttcgaaagtgcgcccaacccccgggacctgaagatcgtggtgctgatgctg
acgggagaggtgcagaagcagcagctggaggaggcccagagagccatcctgcaggccaag
tgcaaaggctacttcttcgtgatcctgggcattggcaggaaggtgaacgtcaaggagctg
tacagctctgccagcgagcccaacgacgtcttcttcaagctagtggacaagtcgaccgag
ctcaacgaggagcccctaatgcgcttcgggaggctgctgccgtccttcgtcagcagtaaa
gatgctttctacctgtccccagatatcaggaaacagtgtgattggttccaagcagaccaa
ccggcaaagaatctcgtgcagtttggttacaaacaaataaatgttcctaataacgttact
tcaagtcctacatccaaactggtgaccacaacgaagccggtgatcaccaccaccaaacca
gtaacggtggtgaacctgccagcctcaaagccagctgccacgagacctgtggatgagaga
cccgcagctgggagatccgtggccaccaagacggacagtgccaggcccgtggccaccaag
accgaggccaccaagactgaagctgccaaatctgtggtcaccaaggctgaggctgcaaaa
cccacggccaccaagactgaagccactaagaccgaggctgcaaagctcatggccaccaag
actgaggccaccaaatctgtggcttccaggcccgaggctgtaaagacagacacagccaga
cctgcagcagccgcgaagcctgcagcagccaaacctgcccctgccagaccccccactgct
gccaggtccatggccacgaggtccgaggcccccaggccccaggcagccaaactggctgcc
agcagacccggcactgctaagcccgtggtgaaagcacctcgcgagatccacgtgtccgag
gtcacagagaacagcgccaggctgcactgggagaggcccgagccccccagcccttacgta
tacaacctcaccgtcacctcggcccacgatcaggccgtggttctgaagcagaacctcacg
gtcacggcccgtgtcgtcgggggcctgctgcccgggcagacttaccatgtcacggtgacc
tgctccctgaggtctcaggtcagagccgtctaccaaggcagcttcagcacgaagaaaatt
cagcctccacctccacaaacagagcgatcagcctctagtgcaaccatcaatctagtggtg
agcgcagaccggttggctgggagtaaagcaggtgagccgttgaaaatcttagatatatgt
aagttgccaaaggacggcggaacttgcagagagtttgtattaaagtggtactatgattcc
gtaactgaaaactgcgcccgattctggtatggaggctgcggtggaaacgaaaacagattt
aattcgcaggatgaatgtgaaaaggtttgccctcctgtgcccatcaagcagcccggagtt
atcgccgcgatggggacctag
DBGET
integrated database retrieval system
