Bubalus bubalis (water buffalo): 102392562
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Entry
102392562 CDS
T05912
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102392562 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102392562 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbub04147
]
102392562 (VPS36)
Membrane trafficking [BR:
bbub04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
102392562 (VPS36)
Exosome [BR:
bbub04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102392562 (VPS36)
Exosomal proteins of colorectal cancer cells
102392562 (VPS36)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
MA3
PH_TFIIH
BBL5
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
102392562
NCBI-ProteinID:
XP_025118727
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Position
13:complement(67992131..68024086)
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AA seq
386 aa
AA seq
DB search
MDRFVWTSGLLEINETLVIQQRGVRIYDGEEKIKFDPGTLLLSTHRLIWRDQKNHECCMA
IPLSQIVFIEEQAAGIGKSAKIVVHLHPAASNKEPGPFQSSKNSYIKLSFKEHGQIEFYR
RLSEEMTQRRWENMPVPQSLQTNRGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMVKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEALKLP
LRLRVFDSGVMVIELQSHKEEEMVASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttcgtgtggaccagcggcctcctggagattaacgaaacgctggtgatccag
cagcggggggtgcgcatctacgacggcgaggagaagataaaatttgatcccgggaccctc
cttcttagtacgcaccgtctaatttggagagatcagaagaatcatgaatgctgcatggcc
attcctctttcccagatcgtgttcattgaagaacaggcagctggaattggaaaaagtgcc
aaaatagtggttcatcttcacccagctgcttctaacaaagaacccggcccattccagagc
agtaagaactcctacatcaagctctccttcaaggaacatggccagattgaattttacagg
cgtctatcagaggagatgacacagcgaagatgggagaatatgccagttccccagtcatta
caaacaaatcgaggaccccagccaggaagaataagggctgtaggaatcgtaggtattgaa
aggaaactggaagaaaaaagaaaagaaactgacaaaaacatttctgaggccttcgaagac
ctcagcaagctaatggtcaaggctaaggaaatggtggagttatcaaagtccattgctaat
aagatcaaagacaagcaaggtgacatcacagaagatgagaccatcaggtttaaatcctat
ttgctgagcatggggatagctaacccggttaccagggaaacctacggctctggcacacag
taccacatgcagctggccaaacagctggctggaatactgcaggcacctttggaggaacga
gggggaataatgtcacttacggaggtgtactgtttagtaaaccgagctcgaggaatggaa
ttgctttcaccagaagatttagtgaatgcgtgcaagatgctggaagctctgaaattacct
ctcagactccgcgtgtttgacagcggcgtcatggtcattgaacttcagtcccacaaggag
gaggaaatggtggcctcagccttggagacggtttcagagaagggatcgttaacatcagaa
gagtttgctaagctcgtgggaatgtctgtccttctggctaaagagaggttgcttcttgct
gagaagatgggccatctttgccgagatgattcagtggaaggcttgcggttttacccaaat
ttatttatgacacagagctaa
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