Bubalus bubalis (water buffalo): 102392601
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Entry
102392601 CDS
T05912
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbub03021
]
102392601 (TAF1B)
Transcription machinery [BR:
bbub03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
102392601 (TAF1B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF2031
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
102392601
NCBI-ProteinID:
XP_006073846
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All DBs
Position
12:complement(87050773..87106268)
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AA seq
590 aa
AA seq
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MDLEEAREFRERCSQCAAVSWGLTDEGKYYCTSCHNVTERSREVIDTGAIPNTKIQAINR
GLKRKRKLEKGWDWYVCEGFQHILYQQAEALQSLGVGPELKNEVLHNFWKRYLQKSKQAY
CKNPVYTSRRKTTVLEDNLSQSDWESEPELLSDVSCLSFAESGAESQPDVRTPKPFPIIK
ASHSETTSVCSGSLDGVEYSLRKEKGVMKMSVPRTLAFCYLSLLWQRETITLSDLLRFVE
EEHIPYIHAFQHFPEEMKLYGRDKGIFAIESWPNYEVIFKKIIEVATFLDLPRFPDITEN
CYLHPNVLCMKYLMEVNLPDEMHNLTCLVVKATGIGEVDFLRFDPIAKKAKTVKYDVQAV
AVIVVALKLLFLLDDNVEWSLSNIAEKYNEKNKEDKPWFDFRKWYQVMKKAIDEKKQKWE
EARAKFLWKGEKPLYYSAIDRPVVYKRREMVVSLQKQFSTLVDSAPNIEKKKPSSFQFNW
TEEDSERPCFHGHSLQGVLQQKGQSLTTKNSLYWLSTQKFCKSHCKHVTTYEESNFSLSY
QFILNLFSFLLRIKTSFLHEEVSLIEKRLFKAKYNKTNKKSSRSRKTRKY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggacctggaggaggcgagagagttcagagagcgctgttctcagtgtgccgctgtttct
tggggtcttactgatgaaggcaaatattattgcacttcttgccacaatgttacagaaaga
tctagggaagttatagacactggggctattcctaatactaaaatacaagccatcaaccgg
ggacttaaaagaaaacgaaaacttgagaaaggctgggattggtatgtgtgtgaaggtttt
cagcacatactttatcaacaagcagaagccttacagagccttggagtaggcccagagtta
aagaatgaagttttgcataatttttggaagcgctaccttcagaagagcaagcaggcatat
tgtaaaaacccagtttataccagcagaaggaaaactacggtattagaagataatttgagc
caatcagattgggagagtgagcctgagctgctgagtgacgtgagctgtctgtcttttgct
gagagtggagcagagtctcagcctgatgtccgcaccccaaagcctttccccatcatcaaa
gcatcacactcagaaacgacctctgtctgttctgggtctcttgatggagtggaatattcg
ctgcggaaggagaagggggtcatgaagatgagtgtaccacggacgctagccttctgctat
ctgtcattactttggcagagagagacaattactctttcagatcttttgagatttgttgaa
gaggaacatattccttacatacatgcttttcagcattttccagaagagatgaaattatat
ggacgtgacaaaggaatctttgccatagagtcttggcctaactatgaagttatctttaaa
aaaataattgaagttgccacatttttagatttgccgcgttttccagacataactgaaaac
tgctatcttcatccaaacgtcttgtgtatgaaatacttgatggaggtcaatctccctgat
gaaatgcataatttaacctgcctagtggtaaaagcgactggaataggagaagtggatttt
ctaagatttgatcctatagctaaaaaggcaaaaactgttaaatatgatgtgcaagctgta
gctgtcattgtagtggcgttgaaactgctctttttattggatgacaatgtagaatggtct
ttgtctaatattgctgagaaatataatgaaaagaacaaagaagataaaccatggtttgat
ttcagaaaatggtaccaagttatgaagaaagctattgatgagaaaaaacaaaagtgggag
gaagccagggcaaagtttctgtggaagggtgaaaagccactctactactcagccattgac
aggccggtagtgtataaaagaagagaaatggtggtgagtcttcagaaacagtttagcaca
ctggtggattcagcaccaaacattgaaaaaaaaaaaccttcaagttttcagttcaactgg
actgaagaggacagcgagaggccttgtttccatgggcatagcctccagggagtcctgcag
cagaaaggccagtccctgacaaccaagaattccctctactggctgagtacacagaagttc
tgtaaaagccattgtaagcatgtgacaacctacgaagaatccaatttttctctgagttac
cagtttatactaaatctcttctccttcttgctaagaataaagacttcctttctccatgaa
gaagtgagcttaatagaaaagagactttttaaagcaaaatataataaaacaaacaagaaa
tcttcaagatccaggaaaacaagaaaatactga
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