Bubalus bubalis (water buffalo): 102392602
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Entry
102392602 CDS
T05912
Symbol
RAD54L
Name
(RefSeq) DNA repair and recombination protein RAD54-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102392602 (RAD54L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbub03400
]
102392602 (RAD54L)
DNA repair and recombination proteins [BR:
bbub03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
102392602 (RAD54L)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Zn_ribbon_4
Motif
Other DBs
NCBI-GeneID:
102392602
NCBI-ProteinID:
XP_044800994
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Position
6:complement(99502236..99528721)
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AA seq
758 aa
AA seq
DB search
MGGAVAAPRERRSLAPSQLAKRKPEDGPSDDEDWQPGAVTPKKPKKSSHETQSQECFLSP
FRKPLTQLMNRPPCLDSSQHEAFIRSILSKPFKIPIPNYQGPLGSRALGLKRAGVRRALH
DPLEEGALVLYEPPPLSAHDQLKFDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS
RRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVRNWYNEV
GKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSV
GLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTA
QEFKKHFELPILKGRDAAASEEDRRVGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQ
VVCCRLTPLQIELYKRFLRQAKPAEELREGKMSVSSLSSITSLKKLCNHPALIYDKCVQE
EDGFEGTLDIFPPGYNSKALEPQLSGKMLVLDYILAVTRSHSSDKVVLVSNYTQTLDLFE
KLCRARRYLYVRLDGTMSIKKRAKVVERFNNPSSPDFVFMLSSKAGGCGLNLIGANRLVM
FDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQ
DVERHFSLGELKELFTLDEAKLSDTHDRLRCRRCVNNHQVWPPHDGSDCTSDLAQWNHST
DKRGLKDEVLQAAWDAASTAITFVFHQRSHEEQRGLHL
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtgcggtggcggcaccgcgggagaggaggagcttagctcccagccagctggcc
aagagaaaaccggaagacggaccctctgatgatgaagactggcagcctggagcagtgact
cctaagaaacctaagaaatccagccatgagacccagagccaggagtgtttcctgtctcct
tttcggaaacctttgactcaactaatgaatcgaccaccctgtctggacagcagtcaacat
gaagcatttattcgaagcattttgtcaaagcctttcaaaattcccattccaaattatcaa
ggtcctctgggctctcgggcattgggcctcaaacgggctggggtccgccgagccctccat
gaccccctggaagaaggtgccttggttctgtatgagcctcccccactgagcgcccatgac
cagctaaagtttgacaaggaaaaacttcctgtccatgtggttgttgatcctattctgagt
aaggtcttgaggcctcatcagagagagggagtaaagttcctgtgggagtgtgtcaccagt
cggcgcatccctgggagccatggctgcatcatggctgatgagatgggcctgggcaagacg
ctgcagtgcatcacactgatgtggacgcttctgcgccagagtccagactgcaagccagaa
attgacaaggcagtggtggtgtcgccctccagcctagtgaggaactggtacaatgaagtt
gggaaatggcttggagggaggatccaacctctggccatcgatggaggctctaaggacgag
atagaccaaaagctggaaggatttatgaaccagcgtggtgccagagtgccttctcccatc
ctcatcatttcctatgagactttccgccttcacgttggagtcctccagaaagggagtgtt
ggactggtcatatgtgatgagggacacaggctcaagaactctgagaatcagacttatcag
gccttggacagcttgaacaccagccgacgggtgctcatctccgggacccccatccagaat
gatctccttgagtatttcagcttggtacactttgtcaactcgggaatcctgggaaccgcc
caggagttcaagaagcattttgaactgccaattctgaagggtcgagatgcagctgccagt
gaggaagataggcgtgtaggagaggagcgcctgcgggagctcaccagcattgtgaatagg
tgcctgatacggaggacatctgatatcctttctaaatatctgcctgtgaagatcgagcag
gtggtttgttgtaggctcacaccccttcagattgaattatacaagaggtttttgagacag
gccaagccagcagaagagttgcgcgagggcaagatgagtgtgtcttctctttcttccatc
acctcactgaagaaactgtgtaatcatccagctttaatctatgacaagtgtgtgcaagag
gaagatggctttgaaggtaccttggacatatttccccctggttataactccaaggctcta
gagcctcagctgtcaggtaagatgctggtccttgattacattctggcggtgacccgaagc
cacagcagtgacaaagtagtgctggtgtccaattacactcagacattggacctctttgag
aaactctgccgagcccgaaggtacttatatgttcgcttagatggcacgatgtccattaag
aagcgagccaaggttgtggagcgcttcaacaacccatcgagtcctgactttgtcttcatg
ctaagcagcaaagctgggggctgtggcctcaatctcatcggggctaaccgactggtcatg
tttgaccctgactggaacccagccaatgatgaacaagccatggcccgggtctggcgtgat
ggtcaaaagaagacctgctatatctatcgcctactgtctgcaggaaccatcgaggagaag
atctttcagcgtcagagccataagaaagcactgagcagctgtgtggtggatgaggagcag
gatgtggagcgacacttttctctcggcgaattgaaggagctgtttaccctggatgaggct
aagctcagtgacacacatgacaggttgcgctgccggcgctgcgtcaacaaccaccaggtc
tggccaccccatgacggttctgactgcacctcagacctggctcagtggaaccacagcact
gataagcgggggctcaaggatgaggtactccaggctgcttgggatgctgcctccactgcc
atcacctttgtcttccaccagcgttcccatgaggagcagcggggcctccacctttaa
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