Bubalus bubalis (water buffalo): 102392627
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Entry
102392627 CDS
T05912
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102392627 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bbub04990
]
102392627 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
bbub04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
102392627 (THSD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
TSP1_CCN
ADAMTS_CR_3
TSP1_spondin
PLAC
Motif
Other DBs
NCBI-GeneID:
102392627
NCBI-ProteinID:
XP_025152300
LinkDB
All DBs
Position
11:complement(84228971..84897491)
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AA seq
1017 aa
AA seq
DB search
MVSCVMESLSVLGSLLLLGLQLVCPQPSTEHRKVPQRMAVAEGAPEDGGGGAPGVWGSWG
PWSACSRSCSGGVMEQTRPCLPSSYRTRGGPRPGAPARAFAGHVVSAVRTSVPLHRSREE
TRALAGLNSSRQGPALRGSRHPQARGREPTAERRSRIRGPIGPGKYGYGKAPYILPLQTD
SAHPPQRLRRQRPSSRNSRSQGASGSSHGYHPSAHQHPQHGPLYQSESGPRSGLQASEGS
VYQLPLTHDQGFSAASSLFHSPEASSSPGLGAPRAAQSFSQPTRSTAISCIGAYRQYKLC
NTNVCPESSRSIWEVQCASYNNKPFMGRFYEWEPFAEVKGNRKCELNCQAMGYRFYVRQA
EKVIDGTPCDQNGTAICVSGQCKSIGCDDYLGSDKVVDKCGVCGGDNTGCQVVSGVFKHA
LTSLGYHRVVEIPQGATKINITEMHKSNNYLALRSRSGRSIINGNWAIDRPGKYEGGGTM
FTYKRPNEISSTAGESFLAEGPTNEILDVYMIHQQPNPGVHYEYVIMGNNAISPQVPPHR
RPGEPFNGQLVPEGRSQQEGKEKEGDQEKADERGGAPEMFTLESAQTFPVRQPDRFSLHR
PDSVVPPAPQPPRPSRDHNWKQLGTTECSTTCGKGSQYPIFRCVHRNTHEEVPESYCDLT
MKPTPEEEPCNIFPCPAFWDIGEWSECSKTCGLGMQHRQVLCRQVYANRSLTVQPYRCQH
LEKPETTSTCQLKICSEWQIRTDWTSCSVPCGVGQRTRDVKCVSNIGDVVDDEECNMKLR
PNDIENCDMGPCAKSWFLTEWSERCSAECGAGVRTRSVVCMTNHVSSLPLEGCGSNRPAE
ATPCDNGPCTGKVEWFAGSWSQCSIECGSGTQQREVICVRKNTDTFEVLDPYECSFLEKP
PSQQPCHLKPCGAKWFHTEWSMCSKTCQGGFRVREVRCLADDMTLSNLCDPQLKPEEKES
CNPQDCVPEVDENCKDRYYNCNVVVQARLCVYNYYKTACCASCTRVAHRHSGFPGSR
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggtttcctgtgtcatggagtctctcagtgtcctgggttccctcctgctgcttggactc
cagctcgtctgcccgcagccctccactgaacacagaaaggtcccgcagcggatggctgtg
gccgagggcgctccggaggatggcggtggtggggccccgggcgtgtggggctcctggggc
ccctggtccgcctgctcgcgcagctgcagcggcggcgtgatggagcagacccggccctgc
ctgcccagctcttaccgcacacgtgggggaccgcgacctggagcccccgcgcgcgccttc
gcgggccacgtggtgtcagccgtgcgcacatcggtgccgctgcaccgcagccgcgaggag
acacgcgcccttgccggcctcaactccagtcgccaaggcccggcgctccgaggcagccga
cacccgcaggcccggggccgcgaacccacggcggagagaaggagcaggatccgaggtccc
atcggccctggcaagtatggttatgggaaagccccatacatcttgccattgcagacagac
tctgcacacccaccccagaggcttcggcggcagaggccctcatcccggaattccaggtcc
cagggggcatctggctctagtcatggctaccacccttcagctcaccagcacccccagcat
ggacctctgtaccagagtgagagcggcccgcgttctggactgcaggcctcagagggctct
gtctaccagctgcctttgacccatgaccaaggcttctctgcagcctccagtctcttccac
agcccagaggcaagcagcagccctgggctgggggcccccagggcagctcagagcttctcc
cagcccaccagatctacagccatctcctgcatcggggcctatcggcagtacaagctgtgc
aacacgaatgtgtgtccagaaagcagtagaagtatctgggaggtacagtgtgcatcctac
aacaacaagccgttcatgggccggttttatgaatgggaaccatttgcagaagtcaagggc
aatcgaaagtgtgagctgaactgccaggcaatgggctaccgcttctatgttcggcaagct
gagaaggtcattgatggtaccccctgtgaccagaatggtacggccatctgcgtgtccggg
cagtgcaagagcattggctgtgatgactacctaggctccgacaaagttgtggacaaatgc
ggggtgtgcggaggcgataacacaggctgccaggtcgtgtcgggtgtgtttaagcacgcc
ctcaccagcctgggctaccaccgagttgtggagattccccaaggagccacaaaaatcaac
atcaccgagatgcacaagagcaacaactatttggccttgcgaagtcgttctggccgctcc
atcatcaatgggaactgggcaattgaccggcctggaaaatacgagggcggagggaccatg
ttcacatacaagcgtccaaatgagatttcgagcactgctggagagtcctttttggccgaa
ggtcccactaatgagatcttggatgtttatatgatacaccagcagcctaaccccggagtc
cactatgagtacgtgatcatggggaacaacgccatcagcccacaggtgccacctcacagg
agaccaggggagcccttcaatggccagctggtaccagaagggaggagccagcaggaggga
aaagagaaagagggggaccaggagaaggcagacgagcgtggcggggcacctgaaatgttc
acgttggaatcagcacagaccttcccggtcaggcagccggacagattctctctccaccgg
cctgacagtgtggtgccaccagctccacagccccctcggccgagccgggatcacaactgg
aagcagctggggaccacagagtgctcgacaacctgcgggaaaggatcacagtaccctatt
tttcgctgtgtgcacagaaacactcacgaagaggttcctgagagctactgtgacttgacc
atgaagccgacccccgaggaggagccctgcaacatcttcccttgcccagccttctgggac
atcggggagtggtccgagtgcagcaagacctgcggcctgggcatgcagcaccgccaggtt
ctgtgtcgccaggtgtacgccaaccgcagcctgacggtgcagccctaccgctgccagcac
ctggagaagcccgagaccaccagcacctgccagctcaagatctgcagcgagtggcagatc
cggacggactggacctcgtgttcggtgccttgtggagtgggacagaggacccgggacgtg
aagtgtgtgagcaacatcggggacgtggtcgacgacgaggaatgcaacatgaagctccgg
cccaatgacattgagaactgcgacatggggccctgcgccaaaagctggttcctgaccgag
tggagcgagcggtgctcggcggagtgcggggctggagtgcggacacgctcagtggtgtgc
atgaccaaccacgtcagcagcctgcccctggagggctgtgggagcaaccggccagcggag
gccaccccgtgtgacaacgggccctgcacgggcaaggtggagtggtttgcaggcagctgg
agtcagtgctccatcgagtgtgggagcgggacccagcagagggaggtgatctgtgttagg
aagaacacagacacttttgaagtgctggacccctatgaatgttcctttctggagaaaccc
cccagccagcaaccctgccacctcaagccctgtggggccaaatggtttcacacagaatgg
agcatgtgttccaagacctgtcagggtggcttccgcgtccgggaagtccgttgtctggca
gatgacatgaccctaagtaatctctgtgaccctcagttgaaaccagaagaaaaagaatct
tgtaaccctcaggactgtgtccctgaagttgatgaaaactgcaaggaccggtactacaac
tgcaacgtggtggtccaggccaggctctgcgtctacaactactacaagaccgcctgctgc
gcctcctgcacacgcgtggcccacaggcactcgggcttcccagggagcagataa
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