Bubalus bubalis (water buffalo): 102392668
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Entry
102392668 CDS
T05912
Symbol
SIX1
Name
(RefSeq) homeobox protein SIX1
KO
K15614
homeobox protein SIX1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
102392668 (SIX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102392668 (SIX1)
Transcription factors [BR:
bbub03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
102392668 (SIX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
102392668
NCBI-ProteinID:
XP_025151200
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Position
11:30540139..30544865
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AA seq
284 aa
AA seq
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MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQGNMGH
ARSSNYSLPGLTASQSAHSLQAHQHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgctgccatcgttcggcttcacacaggagcaagtggcgtgcgtgtgcgaggtt
ctgcagcaaggcgggaacctggagcgcctgggcaggttcctgtggtcgctgcccgcctgc
gaccacctgcacaagaatgaaagcgtgctcaaggccaaggccgtggtcgccttccaccgc
ggcaacttccgcgagctctacaagatcttggagagtcaccagttctcgcctcacaatcac
cccaagctgcagcaactgtggctgaaggctcactacgtggaagccgagaagttacgcggc
cggcccctgggcgcggtgggcaaatatcgggtgcgccgaaaattccctttgccacgaacc
atctgggacggcgaggagaccagctactgcttcaaggagaagtcgcggggcgtgctgcgg
gagtggtacgcgcataacccttacccctcgccgcgtgagaagcgggagctggccgaggcc
acgggtctcaccaccacccaggtcagcaactggtttaagaaccggaggcaaagagaccgg
gccgccgaggccaaggaaagggagaataccgaaaacaataactcctcctccaacaagcag
aatcaactctctcctctggaagggggcaagccactcatgtccagctcagaagaagagttc
tcacctccccagagtccagaccagaactccgtccttctgctgcagggcaacatgggccac
gccaggagctccaactattctctcccgggtttaacagcctcacagtcagcgcacagcctg
caagcccaccagcatcagctccaggactccctgctgggccccctcacctccagtttggtg
gacttggggtcctaa
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