Bubalus bubalis (water buffalo): 102392969 Help Entry 102392969         CDS       T05912                                  Symbol TNR Name (RefSeq) tenascin-R isoform X1   KO K06252   tenascin Organism bbub  Bubalus bubalis (water buffalo) Pathway bbub04151   PI3K-Akt signaling pathway bbub04510   Focal adhesion bbub04512   ECM-receptor interaction bbub05165   Human papillomavirus infection bbub05206   MicroRNAs in cancer Brite KEGG Orthology (KO) [BR:bbub00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     102392969 (TNR)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102392969 (TNR)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102392969 (TNR)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     102392969 (TNR)   09172 Infectious disease: viral    05165 Human papillomavirus infection     102392969 (TNR)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:bbub00536]     102392969 (TNR) Glycosaminoglycan binding proteins [BR:bbub00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102392969 (TNR) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 Fibrinogen_C EGF_Teneurin EGF_TEN EGF_Tenascin Ig_DSCAM-DSCAML_C EGF_2 Pur_ac_phosph_N FN3_Tor_3rd Tissue_fac Motif Other DBs NCBI-GeneID:  102392969 NCBI-ProteinID:  XP_006060419 LinkDB All DBs Position 5:24010168..24497180 Genome browser AA seq 1358 aa AA seqDB search MGADRETVVLKNVLIGINLILLGSLLKPSECQLEVTMERVQRPAVEEEGGAASYNASGKE QPVVFNHVYNINVPLDSLCSSGLEASAEHEVNTEDEVLTEYTGQTSDHESQVTFTHRINL PKKACPCASSAQVLQELLSRIEMLEREVSVLRDQCTSNCCPESAATGQLDYIPHCSGHGN FSLESCGCICDQGWFGKNCSEPYCPLGCSSRGVCVDGQCVCDSEYSGDDCSELRCPTDCS SRGLCVDGECVCEEAYTGEDCSELRCPGDCSGKGICANGTCLCQEGYVGEDCGQRRCPNA CSGRGHCQEGLCLCEEGFQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQ PTALGGLQLQQRVPGDWSGVTISELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQG LRFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY IVNVVALKEQARSPPTSASVSTVIDGPTHILVRDVSDTVAFVEWTPPRAKVDFILLKYGL VGGEGGKTTFRLQPPLSQYSVQALRPGSLYEVWVSAVRGTNESEATATQFTTEIDAPKNL RVGSRTATSIELEWDNSEAEVQEYKVEYSSLAGEQYHELLVPKSIGPTSRATLTDLVPGT EYGIGISAIMNSQQSVPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITF TPSSGIASEVTVPKDRTSYTLTDLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISHL HFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMMEVSLDATKRHAVLMGLQPATEY IVNLVAVHGTVTSEPIVGSITTGIDPPKDITISNVTKDSVMVSWSPPVASFDYYRVSYRP TQVGRLDSSVVPNTVTEFTITKLYPATEYEISLNSVRGREESERICTLVHTAMDNPADLT ATNITPTEALLQWKAPMSGVENYVIVLTHFAVAGETILVDGDSEEFQLVDLLPRTHYTVT MYATSGPLTSGTVSTNFSTLLDAPANLTASEVTRQSALISWQPPRAEIENYVLTYKSTDG SRKELIVDAEDTWIRLEGLSESTDYTVLLQAAQDTERSSITSTAFTTGGRVFPHPQDCAQ HLMNGDTLSGVYTIFLNGELSRKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWTEYRVG FGNLEDEFWLGLDNIHRITSQGRYELRVDMRDGQETAFASYDRFSVEDNRSLYKLRLGGY NGTAGDSLSYHQGRPFSTEDRDNDIAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG INWYHWKGHEFSIPFVEMKMRPYSHRLVAGRKRRSLQF NT seq 4077 nt NT seq  +upstreamnt  +downstreamnt atgggggcagacagggagacagtggtcttgaagaacgtgctcattggcatcaacctgatc cttctgggctccttgctcaagccctcggagtgtcagctggaggtcaccatggaaagggtc cagagaccagcggtggaagaggaaggaggcgctgccagctacaatgcatcaggcaaggag cagccggtggtcttcaaccacgtgtacaacatcaacgtgcccctggatagcctctgctcc tcagggctggaggcctcggccgagcatgaggtgaacaccgaagacgaggtgctgacggag tacacgggccagacctcagaccacgagagccaggtcaccttcacgcacaggatcaacctc cccaagaaggcctgcccgtgtgccagctcggcccaggtgctacaggagctgctgagccga attgagatgctggagagggaagtgtctgtgctgcgggaccaatgtaccagcaactgctgc ccagagagtgcggccacaggacaactggactatatccctcactgcagtggccatggcaac tttagcctggagtcctgtggctgcatctgcgatcaaggctggtttggcaagaactgctca gagccctactgccccctgggctgctccagtcggggtgtgtgtgtggacggccagtgcgtc tgtgacagcgagtacagcggggacgactgctcggagctccggtgcccaaccgactgcagc tcccgagggctgtgcgtggacggggagtgcgtctgcgaagaggcctacacgggcgaggac tgcagcgagctgaggtgccctggggactgttcggggaaggggatctgtgccaacggtacc tgcctgtgccaggaaggctacgtcggtgaggactgcggccagcggcggtgtccaaatgcc tgcagcggccgaggacactgccaggaggggctgtgcctctgtgaagagggcttccagggc cctgactgctcagcagttgcccctccagaggacttgcgagtggctggtatcagcgacagg tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag ccgacggccctggggggcctccagctccagcagcgggtgcctggagattggagtggcgtc accatctcagagctggagccaggtctcacctacaacatcagcgtctacgctgtcattagc aacatcctcagccttcccatcactgccaaggtggccacccatctctccacgcctcaaggg ctccgattcaagacgatcacagagaccaccgtggaggtgcagtgggagcccttctcattc tccttcgatgggtgggagatcagcttcattccaaagaacaatgaaggaggggtgattgcc cagctccccagtgacgtcacatccttcaaccagacgggactaaagcctggggaggaatac attgtcaatgtggtggctttgaaagagcaagcccggagcccccctacctcggccagcgtc tctactgtcattgatgggcccacgcatatcctagttcgagatgtctccgacaccgtggcc ttcgtggagtggaccccacctcgagccaaagtcgatttcattctcttgaagtacggcctg gtgggtggggaaggtgggaagaccaccttccggctgcagcctcccctgagccagtactcg gtacaggccctgcggccaggctccctgtacgaggtgtgggtcagcgcggtccgcggaacc aacgagagcgaggccactgccacccagttcacaacagagattgatgcccccaagaacctg cgggttggttcccgcacagcaaccagcattgagcttgagtgggacaacagcgaagcagag gttcaggagtacaaggttgagtacagcagcttggcgggcgagcagtaccatgagctgctg gtccccaaaagcatcggaccaaccagcagagccacactcaccgatctggtgcctggcact gagtatgggattggaatatccgccatcatgaactcacagcaaagcgtaccagccaccatg aatgccaggactgaactcgacagtcctcgagacctcatggtgacagcctcctcggaaacc tccatctccctcatctggaccaaggccagtggccccattgaccactaccgaattactttt accccatcctctgggatcgcctctgaagtcactgtgcccaaggacaggacctcgtataca ttgacagatctagagcccggggcagagtacatcatttcaatcacagctgagaggggccgg cagcagagcctggagtccactgtggatgccttcacaggcttccgccccatctcgcatttg cacttttctcacgtgacctcctccagcgtgaacatcacctggagtgacccatcccctccg gcagacagactcattctcaactacagcccgcgggatgaagaggaagaaatgatggaggtc tccctggatgccaccaagaggcatgctgtcctgatgggcctgcagccagctaccgagtac attgtgaatctggtggcagtccatggcacagtgacctctgagcccatcgtgggctccatc accacaggaattgatcctcccaaagacatcacaattagcaatgtgaccaaggactcagtt atggtctcctggagccctcctgttgcatcttttgattactaccgagtatcctatcggcca acacaagtgggacgactggacagctcagtggtgcccaacacagtgacagaattcaccatc accaagctgtacccagctacggaatatgaaattagcctcaacagtgtgcggggcagggag gagagtgagcggatctgcactcttgtgcacacagccatggacaatcctgcggacctgact gctaccaacatcaccccaaccgaagccctgctgcagtggaaggcgcccatgagcggagta gagaactacgtcattgttctcacccactttgcagttgctggagagaccatcctggttgat ggagacagtgaggaattccagcttgttgacctgcttcctaggacccactacacggtcacc atgtatgccaccagcgggcctctcaccagtggtaccgtcagtaccaacttctctaccctc ctggatgcccctgcaaatctgacagctagcgaagtcaccagacaaagtgccctgatctcc tggcagcctcccagagcagagattgaaaactacgtcttgacctacaaatccactgatgga agccgcaaggagctgattgtggatgcggaggacacatggatccgactggagggcctgtcg gagagcacagactacacggtgctcctgcaggcggcccaggacacggagcggagcagcatc acctccactgccttcaccacagggggccgggtcttccctcatcctcaagactgtgcccag cacttgatgaacggagacactctgagcggggtttacaccatcttcctcaacggagagcta agccggaagttacaggtgtactgcgacatgaccaccgatgggggtggttggattgtattc cagaggcggcagaatggccaaactgattttttccggaaatggactgagtaccgtgttggc tttgggaacctggaggatgagttttggctggggctggacaacatacacaggatcacgtcc cagggccgctacgagctgcgcgtggacatgcgtgatgggcaggagaccgcctttgcctcc tacgacaggttctctgttgaggacaacagaagcctgtacaaactccgcctaggaggttac aacggcaccgcaggggactctctcagctaccatcagggccgcccattctccacggaggac agagacaatgacatagcagttaccaactgtgccatgtcctacaagggcgcttggtggtat aagaactgccaccggaccaacctcaatgggaaatacggcgagtccaggcacagtcagggg atcaactggtaccactggaaaggccacgagttctccatccccttcgtggagatgaagatg cgcccatacagccaccgtctcgtggcagggagaaaacggcggtccttgcagttctaa

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