Bubalus bubalis (water buffalo): 102392994
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Entry
102392994 CDS
T05912
Symbol
TMC6
Name
(RefSeq) transmembrane channel-like protein 6 isoform X2
KO
K21988
transmembrane channel-like protein
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bbub02000
]
102392994 (TMC6)
03037 Cilium and associated proteins [BR:
bbub03037
]
102392994 (TMC6)
Transporters [BR:
bbub02000
]
Other transporters
Pores ion channels [TC:
1
]
102392994 (TMC6)
Cilium and associated proteins [BR:
bbub03037
]
Other cilia and associated proteins
Stereociliary proteins
102392994 (TMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF4234
Motif
Other DBs
NCBI-GeneID:
102392994
NCBI-ProteinID:
XP_025135379
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All DBs
Position
3:complement(9266145..9283966)
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AA seq
810 aa
AA seq
DB search
MSQSPAFVLNVLETPEDPEGQEPSPYDESEVHDSFHQLIQEQSRWVAEEGLELQQRQPGT
GALGASGSDHETMLGPEGAPVYSMATLRILASMPSRTIGRSRGAIISQYYSRTVKLRRRA
GRPQLRDMGRSARPSLRLYDLELDSAVLEEEEKRGLLVKELQGLTAAQRDHMLRGMPLSL
AEKRCLREESRPPRGKHRAQRHHGLLSCCDQLRDSCVLASHNLGLALLSGLQALMPWRYA
LKRIGGQFGSSVLSYFLFLKTLLAFNALLLLPLLAFIVGVQAAFPPAPAGPVPAFTGLEL
LTGGGHFTHSVMYYGYYSNATLNQPCASPLDGSQCTPEAGSLPYSMPLAYLFTLGAAFFI
TCITLVYSMSHSFGESYRVGSTSGVHAITVFCSWDYKVTQRWATRLQHDNIRTQLKELLA
EWQSRQHRRSACGQLRRVAVLGLVWLLCLGTTLGCTLAVYTFSELMIKSPVSAKREAVLL
LLPLVVCLLNLGGPYLFRILAALERHDSPVLEVYVAICRNLILKMVTLGILCYHWLGRRV
GTLKDQCWENFVGQELYRLMVMDFIFTLLDTLLGELVWRLFSEKQLKRKGKPEFDIAGNV
LELIYGQTLTWLGVLFSPLLPAMQIIKLLLLFYIKKASLMANCQAPRRPWKASHMSTVFI
SLLCFPSFLGAAVFLCYAVWQVKPSSTCGPFRTLDTMYEAGKVWVRRLEKAGPRVSWLPW
IHRYLVEDTFPIYLVSALLLAVIYLNIQVVKGQRKVICLLKEQISNEGEDKIFLINKLQR
VYERKERSRAGRTEEAVTPPALFADGWDAQ
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtcgccggcctttgtcctcaatgtcctcgagaccccagaggacccagagggc
caagagcccagcccctatgatgagagcgaagtgcatgactccttccaccagctcatccag
gagcagagccgctgggtggccgaggaggggctggagctgcagcagaggcagccggggact
ggtgccctgggggcctcaggcagcgaccacgagaccatgctggggcctgagggtgccccc
gtctacagcatggccacgctccgcatcttggccagcatgcccagtcgcaccattggccgg
agccgtggggccatcatctcccagtactacagccgcacggtgaagctgcgtcgcagggcc
ggccggccgcagctcagggacatgggccgctcagcccggcccagcctccgcctgtacgac
ctggagctggactctgcggtcctggaggaggaggagaagcggggcctcctggtgaaggag
ctccagggcctgacagcggcccagagggaccacatgcttcgggggatgcccctgagcctg
gctgagaaacgctgcctgcgggaggagagccggcccccgaggggcaagcacagggcccag
cggcaccatgggctcctctcctgctgcgaccagctccgtgacagctgtgtcctggcctca
cacaacctggggctggcgctgctctcggggctgcaggccctgatgccctggcgctacgcc
ctgaagcggatcgggggccagtttggctccagcgtcctgtcctacttcctcttcctcaag
accctgctggcctttaacgccctgctgctgctgccgctgctggccttcatcgtgggcgtg
caggccgccttcccgcccgcacccgcgggcccggtgcccgccttcacgggcctggagctc
ctcaccggcgggggccacttcacccacagtgtcatgtactacggctactacagtaacgcc
acgttgaaccagccttgtgcctccccactggatggcagccagtgcactcccgaggcgggc
agcctgccctacagcatgccgctggcctacctcttcaccctgggggcagctttctttatc
acctgcatcactctggtctacagcatgtcccactccttcggggagagctaccgagtgggc
agcacctcgggggtccacgccatcaccgttttctgttcctgggactacaaagtgacccag
agatgggccactcggcttcagcacgacaacatccgaacccagctgaaggagctgctggct
gaatggcagtcgcgccagcaccgccggagtgcgtgcgggcagctgcgacgggtggctgtg
ctggggctcgtgtggctgctgtgtctgggcaccactctgggctgcaccctggctgtctac
acgttctcggagctcatgatcaagagcccagtgtccgccaagcgggaggctgtcctgctg
ctcctgcccctggtggtttgcctcctcaacctggggggcccctacctgttccgcatcctg
gctgccctggagcggcacgactccccggtgctggaggtgtacgtggccatctgcaggaac
ctcatcctcaagatggtcaccttggggattctttgctaccactggctgggccgcagggtg
ggcaccctgaaggaccagtgctgggagaacttcgtgggccaggagctgtaccggctcatg
gtgatggacttcatcttcacgctgctggacacgcttctgggggagctggtgtggaggctt
ttctctgagaagcagcttaagaggaaggggaagcctgagttcgacattgcaggaaatgtt
ctggagctgatttacgggcagaccctgacttggctgggggtcctcttctccccgctcctg
cccgccatgcagatcattaaactgctgctcctcttctacattaagaaggccagcctgatg
gccaactgccaggcgccccgcaggccctggaaggcgtcccacatgagcaccgtcttcatc
tccctgctctgcttcccctccttcctgggcgcagccgttttcctctgctacgctgtctgg
caggtgaagccctcaagcacctgtggccccttccggaccctggacaccatgtatgaggcg
gggaaggtgtgggtgcgccgcctggagaaggcgggcccccgcgtctcctggctgccctgg
atccaccgctacctggtggaagataccttccccatctacctggtgtcagccctgttgctg
gctgtgatctacctcaacatccaggtggtgaagggccagcggaaggtcatctgcctcctc
aaggagcaaatcagcaacgagggggaggacaaaatcttcttgatcaacaagcttcagcgt
gtctacgagaggaaggagaggagcagggctggtagaaccgaggaggccgtgacaccccca
gccctgttcgcagacggctgggatgcccagtaa
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